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examples/README.md

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For more larger files, users may find tsv files based on gnomAD 3.1 data from
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https://github.com/ATPs/PrecisionProDB_references/tree/main/gnomAD3.1
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A bigger VCF file from Jurkat cellline can be found
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A bigger VCF file from Jurkat cellline (including the one with T2T CHM13 as reference genome) can be found
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https://github.com/ATPs/PrecisionProDB_references/tree/main/cellline
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[Jurkat.CHM13.RefSeq.vcf.gz](https://github.com/ATPs/PrecisionProDB_references/blob/main/cellline/Jurkat.CHM13.RefSeq.vcf.gz)
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## Run with only local files
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Users can run PrecisionProDB with local genome files and gene models, which can is faster than the running mode of downloading the required files from the Internet.
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genome. if set, use all chromosomes
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including fragments
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```
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```

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