Add Dockerfile

Author: xiu-cs

Dockerfile

@@ -0,0 +1,54 @@
+FROM pytorch/pytorch:2.3.1-cuda11.8-cudnn8-runtime
+
+ARG user_name
+ARG uid
+ARG gid
+ENV HOME=/root 
+
+WORKDIR ${HOME}
+
+ENV DEBIAN_FRONTEND=noninteractive
+RUN apt-get update -y && apt-get install -y --no-install-recommends \
+    vim zsh tmux wget curl htop jupyter python3 python3-pip libgl1-mesa-glx git sudo ssh libglib2.0-0 \
+    tree \
+    && apt-get -y autoclean \
+    && apt-get -y autoremove \
+    && rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/* \
+    && apt-get clean \
+    && apt-get update 
+
+# Create a non-root user
+RUN mkdir /app /logs /data
+RUN groupadd -g ${gid} ${user_name} \
+    && useradd -m -u ${uid} -g ${gid} ${user_name} \
+    && chown -R ${uid}:${gid} /home
+# 
+# Switch to the new user and set home directory as working directory
+USER ${user_name}
+ENV HOME=/home/${user_name}
+WORKDIR ${HOME}
+
+# Install Oh My Zsh and plugins
+RUN sh -c "$(curl -fsSL https://raw.githubusercontent.com/ohmyzsh/ohmyzsh/master/tools/install.sh)" --unattended \
+    && git clone https://github.com/zsh-users/zsh-autosuggestions ~/.oh-my-zsh/custom/plugins/zsh-autosuggestions \
+    && git clone https://github.com/zsh-users/zsh-syntax-highlighting ~/.oh-my-zsh/custom/plugins/zsh-syntax-highlighting \
+    && sed -i 's/^plugins=(.*)$/plugins=(git zsh-autosuggestions zsh-syntax-highlighting)/' ~/.zshrc
+
+RUN echo "export PATH=$PATH:/home/${user_name}/.local/bin" >> /home/${user_name}/.zshrc
+
+# install pip packages
+COPY ./conda/amadeusGPT.yml ${HOME}/amadeusGPT.yml
+SHELL ["/bin/bash", "-lc"]
+RUN source /opt/conda/etc/profile.d/conda.sh && \
+    conda env create -f ${HOME}/amadeusGPT.yml && \
+    conda activate amadeusgpt && \
+    pip install --no-cache-dir --upgrade pip setuptools && \
+    pip install --no-cache-dir gpustat nvitop pytest PySide6==6.3.1 streamlit networkx isort black git+https://github.com/DeepLabCut/DeepLabCut.git
+
+# USER ${user_name}
+USER root
+# ENV HOME=/root
+WORKDIR /app
+
+CMD ["zsh"]
+SHELL ["/bin/zsh", "-c"]