cebra/umap improvement (#11)

* added self keyword into api docs for cebra and umap

* Update README.md

Some terminal requires quote around brackets

* Update setup.cfg

- redundant with [streamlit]

* Update setup.cfg

- extra space

---------

Co-authored-by: Mackenzie Mathis <[email protected]>

Author: yeshaokai

README.md

@@ -12,7 +12,7 @@
 
 - AmadeusGPT is a Python package hosted on pypi. You can create a virtual env (conda, etc, see below*) or Docker and run:
 ```python
-pip install amadeusgpt[streamlit]
+pip install 'amadeusgpt[streamlit]'
 ```
 - If you want the demo, you will also need demo files that are supplied in our repo (see below**), so please git clone the repo. Then, to launch the Demo App execute:
 ```python

amadeusgpt/modules/api/embedding/cebra.py

@@ -1,4 +1,5 @@
 def compute_embedding_with_cebra_and_plot_embedding(
+    self,
     inputs,
     n_dimension=3,
     max_iterations=100,

amadeusgpt/modules/api/embedding/umap.py

@@ -1,5 +1,5 @@
-def compute_embedding_with_umap_and_plot_embedding(
-    inputs, n_dimension=3, color_by_object=False, color_by_time=False, **kwargs
+def compute_embedding_with_umap_and_plot_embedding(        
+    self,inputs, n_dimension=3, color_by_object=False, color_by_time=False, **kwargs
 ):
     """
     Parameters

amadeusgpt/modules/api/kinematics/gait.py

@@ -1,4 +1,4 @@
-def run_gait_analysis(limb_keypoint_names):
+def run_gait_analysis(self,limb_keypoint_names):
     """
     Compute an animal's gait parameters given a list of distal keypoints.
     Examples