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Update detailed_walkthrough.rst
- consider adding TRAILMAP-MS to the model stack :)
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docs/res/guides/detailed_walkthrough.rst

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Detailed walkthrough
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The following guide will show in details how to use the plugin's workflow, starting from a large labeled volume.
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The following guide will show you how to use the plugin's workflow, starting from human-labeled annotation volume, to running inference on novel volumes.
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Preparing images and labels
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Finally, the last tab lets you choose :
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* The model
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* The models
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* SegResNet is a lightweight model (low memory requirements) with decent performance.
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* TRAILMAP is a recent model trained for axonal detection in cleared tissue; use it if your dataset is similar
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* VNet is a possibly more performant model than SegResnet but requires much more memory
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* SegResNet is a lightweight model (low memory requirements) from MONAI originally designed for 3D fMRI data.
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* VNet is a heavier (than SegResNet) CNN from MONAI designed for medical image segmentation.
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* TRAILMAP is our PyTorch implementation of a 3D CNN model trained for axonal detection in cleared tissue.
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* TRAILMAP-MS is our implementation in PyTorch additionally trained on mouse cortical neural nuclei from mesoSPIM data.
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* Note, the code is very modular, so it is relatively straightforward to use (and contribute) your model as well.
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* The loss : for object detection in 3D volumes you'll likely want to use the Dice or Dice-focal Loss.
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