Fixes for UI and tests

- Fix SegResNet input dims in test
- Fixed all tests
- Fixed issues with window inference settings for WNet in UI

Author: C-Achard

napari_cellseg3d/_tests/test_models.py

@@ -26,7 +26,7 @@ def test_model_list():
     for model_name in MODEL_LIST:
         # if model_name=="test":
         #     continue
-        dims = 128
+        dims = 64
         test = MODEL_LIST[model_name](
             input_img_size=[dims, dims, dims],
             in_channels=1,
@@ -114,7 +114,7 @@ def test_pretrained_weights_compatibility():
     for model_name in MODEL_LIST:
         file_name = MODEL_LIST[model_name].weights_file
         WeightsDownloader().download_weights(model_name, file_name)
-        model = MODEL_LIST[model_name](input_img_size=[128, 128, 128])
+        model = MODEL_LIST[model_name](input_img_size=[64, 64, 64])
         try:
             model.load_state_dict(
                 torch.load(

napari_cellseg3d/code_plugins/plugin_model_inference.py

@@ -112,7 +112,7 @@ def __init__(self, viewer: "napari.viewer.Viewer", parent=None):
         ######################
         # TODO : better way to handle SegResNet size reqs ?
         self.model_input_size = ui.IntIncrementCounter(
-            lower=1, upper=1024, default=128, text_label="\nModel input size"
+            lower=1, upper=1024, default=64, text_label="\nModel input size"
         )
         self.model_choice.currentIndexChanged.connect(
             self._toggle_display_model_input_size
@@ -155,16 +155,7 @@ def __init__(self, viewer: "napari.viewer.Viewer", parent=None):
 
         sizes_window = ["8", "16", "32", "64", "128", "256", "512"]
         self._default_window_size = sizes_window.index("64")
-        # (
-        #     self.window_size_choice,
-        #     self.window_size_choice.label,
-        # ) = ui.make_combobox(sizes_window, label="Window size and overlap")
-        # self.window_overlap = ui.make_n_spinboxes(
-        #     max=1,
-        #     default=0.7,
-        #     step=0.05,
-        #     double=True,
-        # )
+        self.wnet_enabled = False
 
         self.window_size_choice = ui.DropdownMenu(
             sizes_window, text_label="Window size"
@@ -310,16 +301,13 @@ def check_ready(self):
 
     def _restrict_window_size_for_model(self):
         """Sets the window size to a value that is compatible with the chosen model"""
+        self.wnet_enabled = False
         if self.model_choice.currentText() == "WNet":
             self.window_size_choice.setCurrentIndex(self._default_window_size)
-            self.window_size_choice.setDisabled(True)
-            self.window_infer_box.setChecked(True)
-            self.window_infer_box.setDisabled(True)
-        else:
-            self.window_size_choice.setDisabled(False)
-            self.window_infer_box.setDisabled(False)
-            self.window_infer_box.setChecked(True)
-            self.window_size_choice.setCurrentIndex(self._default_window_size)
+            self.wnet_enabled = True
+            self.window_infer_box.setChecked(self.wnet_enabled)
+        self.window_size_choice.setDisabled(self.wnet_enabled)
+        self.window_infer_box.setDisabled(self.wnet_enabled)
 
     def _toggle_display_model_input_size(self):
         if (