clean up scripts

Author: MMathisLab

napari_cellseg3d/plugin_model_inference.py

@@ -77,25 +77,6 @@ def __init__(self, viewer: "napari.viewer.Viewer"):
         self.use_window_inference = False
         self.window_inference_size = None
 
-        ############################
-        ############################
-        ############################
-        ############################
-        # TEST TODO REMOVE
-        import glob
-
-        directory = "C:/Users/Cyril/Desktop/test/test"
-
-        # self.data_path = directory
-
-        self.images_filepaths = sorted(
-            glob.glob(os.path.join(directory, "*.tif"))
-        )
-        self.results_path = "C:/Users/Cyril/Desktop/test"
-
-        #######################
-        #######################
-        #######################
 
         ###########################
         # interface
@@ -116,7 +97,7 @@ def __init__(self, viewer: "napari.viewer.Viewer"):
 
         ######################
         ######################
-        # TODO : better way to handle SegRes size reqs ?
+        # TODO : better way to handle SegResNet size reqs ?
         self.segres_size = ui.make_n_spinboxes(min=1, max=1024, default=128)
         self.model_choice.currentIndexChanged.connect(
             self.toggle_display_segres_size

napari_cellseg3d/plugin_review.py

@@ -184,20 +184,6 @@ def run_review(self):
         else:
             zoom = [1, 1, 1]
 
-        #################################
-        #################################
-        #################################
-        # TODO test remove later
-        if utils.ENABLE_TEST_MODE():
-            if self.as_folder:
-                self.image_path = "C:/Users/Cyril/Desktop/Proj_bachelor/data/visual_png/sample"
-                self.label_path = "C:/Users/Cyril/Desktop/Proj_bachelor/data/visual_png/sample_labels"
-            else:
-                self.image_path = "C:/Users/Cyril/Desktop/Proj_bachelor/data/visual_tif/volumes/images.tif"
-                self.label_path = "C:/Users/Cyril/Desktop/Proj_bachelor/data/visual_tif/labels/testing_im.tif"
-        #################################
-        #################################
-        #################################
 
         images = utils.load_images(
             self.image_path, self.filetype, self.as_folder