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one group
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onesampb1-alpha percentile boot CI for any estimator -
trimpbpercentile boot CI for trimmed mean -
trimcibtbootstrap-t CI for trimmed mean -
mestciCI for M-measure of location based on huber's psi using percentile boot method (might be redundant withonesampb) -
momciCI for modified one-step M-estimator (might be redundant withonesampb)
two groups
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yuenyuen-welch method to compare trimmed means (no bootstrap) -
yuenbtbootstrapped-t CI for ut1 - ut2 -
yhbtseems to be similar to yuenbt but modified for when trimming is <20 (maybe not needed) -
pb2genpercentile bootstrap CI for difference between any estimators -
m2ciconvenience function func for comparing M-estimators based on huber's psi -
comvar2bootstrapped comparison of variances -
permgpermutation bootstrap test, any measure of location of scale -
t1waynon-bootstrap method (but robust) for J indep groups (could be used for J>2 too) -
t1wayv2same as t1way but explanatory es is returned for all pairs of groups
two dependent groups
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ydbtbootstrap-t CI for ut1 - ut2 -
loc2difdifference between estimators using all combinations of difference scores -
l2drmcisignificance test forloc2difusing percentile bootstrap -
bootdpcipercentile bootstrap method any estimator; can set options for using difference scores or measures of location based on the marginal distributions -
pcorbcomparing variance of dep groups by extending some correlation-related method (i.e., pcorb(col1 - col1, col1 - col2) ) -
pcorhc4similar topcorb; need more information on usage -
dfriedsome distance based test for J dependant groups (also used for more than 2 dep groups)
one-way for independent groups
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t1waynon-bootstrap method (but robust) for J indep groups (could be in two indep group section too) -
t1wayv2same ast1waybut explanatory es is returned as well -
box1wayanother J=> 2 method based on trimmed means -
t1waybttest hyp of equal trimmed means using bootstrap t method (related tobtrimwhich returns explanatory effect size and allows one to structure data a bit differently;btrimmay not be needed) -
b1waypercentile boot method for comparing J groups; seeing how deeply nest 0 is (1st method) - other methods, especially ones using percentile bootstrap, under "methods based on MCP and linear contrasts" may be applicable here too
one-way methods based on multiple comparisons and linear contrasts
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lincontest linear contrasts with t means -
linconbtest linear contrasts using bootstrap-t method -
tmcppbrom/hoch/ben-type methods using percentile bootstrap and trimmed means -
pbdepthpercentile boot method for comparing J groups; seeing how deeply nest 0 is (2nd method)
two-way designs based on trimmed means
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t2way(no bootstrapping)
three-way designs based on trimmed means
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t3way(no bootstrapping)
two- and three-way multiple comparisons using contrasts (I believe for independent groups)
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mcp2atmall pairwise comparisons for each factor and interactions -
mcp3atmall pairwise comparisons for each factor and interactions -
bbtrimuse bootstrap-t method for comparisons using contrasts -
bbbtrimuse bootstrap-t method for comparisons using contrasts -
bbmcppbtwo-way percentile boot and trimmed mean tests -
bbbmcppbthree-way percentile boot and trimmed mean tests
one-way dependant groups
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dfriedsome distance based test for J dependant groups -
rmanovatrimmed means, no bootstrapping, for J groups -
rmmcpmcp for dep groups with trimmed means and Rom's method for FWE (might be able to extend to higher-level designs; 2 & 3-way) -
rmanovabbootstrap-t method for comparing measure associated with marginal distributions -
pairepbbootstrap-t method for all multi-comparisons -
bptdCI for all linear contrasts (very similar to pairdbp; but you can specify certain contrasts) -
bd1waypercentile boot for J dep groups -
ddepanother percentile boot method for J dep groups -
rmdzeropercentile boot method for J group based on diff scores -
rmmcppbmultiple comparisons for J dep groups using percentile boot method -
lindepbtboot-t method for mcp among J dep groups
within-within (two-way) dependent groups
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wwtrimnon-bootstrap for trimmed means -
wwtrimbtsame as wwtrim but bootstrap-t used -
wwmcpmulti comps for main effects and interactions with linear contrasts (no boot) -
wwmcppblike wwmcp but percentile boot is used -
wwmcpbtlike wwmcpppb but uses bootstrap-t method instead
mixed designs
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bwtrimno bootstrapping -
tsplitbtbootstrap-t for mixed design -
bwtrimbtsame as tsplitbt but reports p values -
sppbatest for factorA using percentile boot -
sppbbtest for factorB using percentile boot -
sppbitest for interaction using percentile boot -
bwmcpall main effects and interactions for bw design bootstrap-t tests -
bwamcpsame for factorA -
bwbmcpsame for factorB -
bwimcpfor interaction (non-bootstrap) -
spmcpaFA; same but with percentile boostrap -
spmcpbFB; same but with percentile boostrap -
spmcpiinteraction; same but with percentile boostrap -
bwmcppbonly for trimmed means? ; all main effects and interactions with percentile bootstrap method
three-way designs with one or more dependent groups
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bbwtrimno boot ominbus for main effect and interactions -
bwwtrimsame as above two are within -
wwwtrimsame as above all within -
bbwtrimbtno boot ominbus for main effect and interactions (bootstrap-t) -
bwwtrimbtsame as above two are within (bootstrap-t) -
wwwtrimbtsame as above all within (bootstrap-t)
three-way methods using multiple comparisons
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rm3mcpno bootstrap all contrasts -
bbwmcpbootstrap-t all comparisons with trimmed means -
bwwmcpbootstrap-t for the corresponding design -
bbwmcppbusing percentile boot -
bwwmcppbusing percentile boot -
wwwmcppbusing percentile boot
effect sizes
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akp.effectdelta (using trimmed mean and winsorized variance) -
yuenv2compare two trimmed means and return explanatory effect size (xi2) -
ees.ciCI for two groups using percentile bootstrap method computes |xi| -
esmcpexplanatory effect size returned for all pairs of J groups (can be used for dep groups) -
ESmainMCPa two-way method for getting explanatory effect size for FA and then FB -
esImcptwo-way explanatory effect for all interactions
correlations and test of independence
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pbcorpercentage bend correlation -
pballfor a set of variables -
wincorwinsorized correlation -
winallfor a set of variables -
corbtest for zero correlation using bootstrapping -
twopcorget CI of rho1 - rho2 (CI for difference of correlations) using percentile boot -
twocortest that two cors are equal (returns a p value and CI)
robust regression
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lsfitciCIs for reg parameters using percentile bootstrap method -
hc4wtesttests hypo that all slope parameters are zero using wild bootstrap method
utilities
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con1waycreate linear contrasts -
con2way -
con3way
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