This module exports annotations from cell type modules in a uniform format to a public s3 bucket for use in other applications.
Annotations can be found in s3://openscpca-celltype-annotations-public-access.
For each library, a JSON file is exported with the following information:
barcodes |
An array of unique cell barcodes |
openscpca_celltype_annotation |
An array of cell type annotations assigned in OpenScPCA-nf |
openscpca_celltype_ontology |
An array of Cell Ontology identifiers associated with the cell type annotation. If no Cell Ontology identifiers are assigned, this will be NA |
module_name |
Name of the original analysis module used to assign cell type annotations in OpenScPCA-analysis |
openscpca_nf_version |
Version of OpenScPCA-nf |
release_date |
Release date of input ScPCA data |