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Try installing flatpaks
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Dockerfile

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@@ -7,7 +7,7 @@ COPY files/scripts /build_files/
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COPY *.pub /keys/
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# Base Image
10-
FROM quay.io/almalinuxorg/atomic-desktop-gnome:10@sha256:9d5325a1f53433e4582ec830b7273de179640a0e3c80699f959cb4cfca23944d
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FROM quay.io/almalinuxorg/atomic-desktop-gnome:flatpaks
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ARG IMAGE_NAME
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ARG IMAGE_REGISTRY

files/scripts/40-flatpaks.sh

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#!/usr/bin/env bash
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set -xeuo pipefail
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# Install system Flatpaks
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cat << 'EOF' >> /etc/flatpak/default-flatpaks/system/install
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com.mattjakeman.ExtensionManager
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com.github.tchx84.Flatseal
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io.github.flattool.Warehouse
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com.google.Chrome
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org.mozilla.Thunderbird
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io.github.dvlv.boxbuddyrs
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com.visualstudio.code
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org.libreoffice.LibreOffice
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EOF

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