Update packages for better 3.13 support (#2238)

Author: dependabot[bot]

.github/workflows/python-test.yaml

@@ -25,7 +25,7 @@ jobs:
       fail-fast: false
       matrix:
         os: ["ubuntu-20.04", "windows-latest"]
-        python_version: ["3.9", "3.10", "3.11", "3.12"]
+        python_version: ["3.9", "3.10", "3.11", "3.12", "3.13"]
     env:
       UV_SYSTEM_PYTHON: 1
     steps:

app/backend/prepdocslib/blobmanager.py

@@ -5,7 +5,7 @@
 import re
 from typing import List, Optional, Union
 
-import fitz  # type: ignore
+import pymupdf
 from azure.core.credentials_async import AsyncTokenCredential
 from azure.storage.blob import (
     BlobSasPermissions,
@@ -77,7 +77,7 @@ async def upload_pdf_blob_images(
         with open(file.content.name, "rb") as reopened_file:
             reader = PdfReader(reopened_file)
             page_count = len(reader.pages)
-        doc = fitz.open(file.content.name)
+        doc = pymupdf.open(file.content.name)
         sas_uris = []
         start_time = datetime.datetime.now(datetime.timezone.utc)
         expiry_time = start_time + datetime.timedelta(days=1)
@@ -95,7 +95,7 @@ async def upload_pdf_blob_images(
             blob_name = BlobManager.blob_image_name_from_file_page(file.content.name, i)
             logger.info("Converting page %s to image and uploading -> %s", i, blob_name)
 
-            doc = fitz.open(file.content.name)
+            doc = pymupdf.open(file.content.name)
             page = doc.load_page(i)
             pix = page.get_pixmap()
             original_img = Image.frombytes("RGB", [pix.width, pix.height], pix.samples)  # type: ignore

app/backend/requirements.in

@@ -2,7 +2,7 @@ azure-identity
 quart
 quart-cors
 openai>=1.3.7
-numpy>=1,<2.1.0 # Used by openai embeddings.create to optimize embeddings (but not required)
+numpy>=1,<2.1.0 # Used by openai embeddings.create to optimize embeddings (but not required). Pinned for 3.9 support.
 tiktoken
 tenacity
 azure-ai-documentintelligence==1.0.0b4

app/backend/requirements.txt

@@ -153,7 +153,7 @@ jinja2==3.1.5
     # via
     #   flask
     #   quart
-jiter==0.5.0
+jiter==0.8.2
     # via openai
 markdown-it-py==3.0.0
     # via rich
@@ -168,7 +168,9 @@ microsoft-kiota-abstractions==1.3.3
     # via
     #   microsoft-kiota-authentication-azure
     #   microsoft-kiota-http
+    #   microsoft-kiota-serialization-form
     #   microsoft-kiota-serialization-json
+    #   microsoft-kiota-serialization-multipart
     #   microsoft-kiota-serialization-text
     #   msgraph-core
     #   msgraph-sdk
@@ -180,8 +182,12 @@ microsoft-kiota-http==1.3.3
     # via
     #   msgraph-core
     #   msgraph-sdk
+microsoft-kiota-serialization-form==0.1.1
+    # via msgraph-sdk
 microsoft-kiota-serialization-json==1.3.0
     # via msgraph-sdk
+microsoft-kiota-serialization-multipart==0.1.0
+    # via msgraph-sdk
 microsoft-kiota-serialization-text==1.0.0
     # via msgraph-sdk
 msal==1.30.0
@@ -205,7 +211,7 @@ numpy==2.0.1
     # via -r requirements.in
 oauthlib==3.2.2
     # via requests-oauthlib
-openai==1.42.0
+openai==1.59.4
     # via
     #   -r requirements.in
     #   openai-messages-token-helper
@@ -321,7 +327,9 @@ opentelemetry-util-http==0.47b0
 packaging==24.1
     # via opentelemetry-instrumentation-flask
 pendulum==3.0.0
-    # via microsoft-kiota-serialization-json
+    # via
+    #   microsoft-kiota-serialization-form
+    #   microsoft-kiota-serialization-json
 pillow==10.4.0
     # via
     #   -r requirements.in
@@ -346,10 +354,8 @@ pyjwt[crypto]==2.9.0
     # via
     #   -r requirements.in
     #   msal
-pymupdf==1.24.9
+pymupdf==1.25.1
     # via -r requirements.in
-pymupdfb==1.24.9
-    # via pymupdf
 pypdf==4.3.1
     # via -r requirements.in
 python-dateutil==2.9.0.post0
@@ -359,7 +365,7 @@ python-dateutil==2.9.0.post0
     #   time-machine
 python-dotenv==1.0.1
     # via -r requirements.in
-quart==0.19.7
+quart==0.20.0
     # via
     #   -r requirements.in
     #   quart-cors
@@ -394,7 +400,7 @@ std-uritemplate==1.0.5
     # via microsoft-kiota-abstractions
 tenacity==9.0.0
     # via -r requirements.in
-tiktoken==0.7.0
+tiktoken==0.8.0
     # via
     #   -r requirements.in
     #   openai-messages-token-helper