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postprocessing muted for docker-based workfow and local workflowfile … #1

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postprocessing muted for docker-based workfow and local workflowfile …

postprocessing muted for docker-based workfow and local workflowfile … #1

Workflow file for this run

.github/workflows/docker_ci.yml at dfeda1f
name: Docker-based CI
on:
push:
branches:
- dumux_and_rotating_cylinder
pull_request:
branches:
- dumux_and_rotating_cylinder
workflow_dispatch:
schedule:
- cron: '3 16 * * *'
jobs:
# -----------------------------
# Build Docker images (Linux only)
# -----------------------------
build-docker:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Build base image
id: base
run: |
docker build -t ci-base -f dockerfiles/Dockerfile.base .
- name: Build Docker images
run: |
docker build -t ci-mesh -f dockerfiles/Dockerfile.mesh .
docker build -t ci-fenics -f dockerfiles/Dockerfile.fenics .
docker build -t ci-kratos -f dockerfiles/Dockerfile.kratos .
docker build -t ci-postprocessing -f dockerfiles/Dockerfile.postprocessing .
- name: Generate config and mesh
run: |
docker run --rm -v ${{ github.workspace }}:/workspace -w /workspace/benchmarks/linear-elastic-plate-with-hole ci-mesh \
python generate_config.py
docker run --rm -v ${{ github.workspace }}:/workspace -w /workspace/benchmarks/linear-elastic-plate-with-hole ci-mesh \
bash -c 'mkdir -p results/linear-elastic-plate-with-hole/mesh && \
for f in parameters_*.json; do \
python create_mesh.py --input_parameter_file "$f" \
--output_mesh_file "results/linear-elastic-plate-with-hole/mesh/mesh_${f%.json}.msh"; \
done'
- name: Run Kratos simulations
run: |
docker run --rm -v ${{ github.workspace }}:/workspace -w /workspace/benchmarks/linear-elastic-plate-with-hole ci-kratos \
bash -c 'mkdir -p results/linear-elastic-plate-with-hole/kratos && \
for f in parameters_*.json; do \
# Convert mesh to MDPA
python kratos/msh_to_mdpa.py \
--input_parameter_file "$f" \
--input_mesh_file "results/linear-elastic-plate-with-hole/mesh/mesh_${f%.json}.msh" \
--output_mdpa_file "results/linear-elastic-plate-with-hole/kratos/mesh_${f%.json}.mdpa"; \
\
# Create Kratos input and run simulation
python kratos/create_kratos_input.py \
--input_parameter_file "$f" \
--input_mdpa_file "results/linear-elastic-plate-with-hole/kratos/mesh_${f%.json}.mdpa" \
--input_kratos_input_template kratos/input_template.json \
--input_material_template kratos/StructuralMaterials_template.json \
--output_kratos_inputfile "results/linear-elastic-plate-with-hole/kratos/ProjectParameters_${f%.json}.json" \
--output_kratos_materialfile "results/linear-elastic-plate-with-hole/kratos/MaterialParameters_${f%.json}.json"; \
\
python kratos/run_kratos_simulation.py \
--input_parameter_file "$f" \
--input_kratos_inputfile "results/linear-elastic-plate-with-hole/kratos/ProjectParameters_${f%.json}.json" \
--input_kratos_materialfile "results/linear-elastic-plate-with-hole/kratos/MaterialParameters_${f%.json}.json"; \
done'
- name: Run fenics simulations
run: |
docker run --rm -v ${{ github.workspace }}:/workspace \
-w /workspace/benchmarks/linear-elastic-plate-with-hole ci-fenics \
bash -c 'mkdir -p results/linear-elastic-plate-with-hole/fenics && \
for f in parameters_*.json; do \
config_name="${f%.json}"; \
python fenics/run_fenics_simulation.py \
--input_parameter_file "$f" \
--input_mesh_file "results/linear-elastic-plate-with-hole/mesh/mesh_${config_name}.msh" \
--output_solution_file_zip "results/linear-elastic-plate-with-hole/fenics/solution_field_data_${config_name}.zip" \
--output_metrics_file "results/linear-elastic-plate-with-hole/fenics/solution_metrics_${config_name}.json"; \
done'
# - name: Postprocessing (metadata + extraction + plot)
# run: |
# docker run --rm \
# -v ${{ github.workspace }}:/workspace \
# -w /workspace/benchmarks/linear-elastic-plate-with-hole \
# ci-postprocessing \
# bash -c '
# echo "Generating metadata...";
# python parameter_extractor.py ./results metadata4ing_provenance.zip;
# echo "Extracting ZIP...";
# mkdir -p ./metadata4ing_provenance;
# unzip -o metadata4ing_provenance.zip -d ./metadata4ing_provenance;
# echo "Plotting provenance...";
# python plot_provenance.py ./metadata4ing_provenance
# '
- name: Upload Artifacts
uses: actions/upload-artifact@v4
with:
name: workflow-results
path:
benchmarks/linear-elastic-plate-with-hole/results
# benchmarks/linear-elastic-plate-with-hole/metadata4ing_provenance/
# benchmarks/linear-elastic-plate-with-hole/metadata4ing_provenance.zip
# benchmarks/linear-elastic-plate-with-hole/*.pdf