added how to run a benchmark

Author: dtyagi

.github/workflows/run-benchmark.yml

@@ -52,8 +52,8 @@ jobs:
           snakemake --use-conda --force --cores all \
             --reporter metadata4ing \
             --report-metadata4ing-paramscript ../common/parameter_extractor.py \
-            --report-metadata4ing-filename metadata4ing_provenance
-          unzip metadata4ing_provenance -d snakemake_provenance
+            --report-metadata4ing-filename snakemake_provenance
+          unzip snakemake_provenance -d snakemake_provenance
       
       - name: run_linear-elastic-plate-with-hole-benchmarks_nextflow
         shell: bash -l {0}

benchmarks/linear-elastic-plate-with-hole/plot_metrics.py

@@ -145,7 +145,7 @@ def plot_element_size_vs_stress(headers, table_data, output_file="element_size_v
 
 if __name__ == "__main__":
     parser = argparse.ArgumentParser(description="Process JSON-LD artifacts and display simulation results.")
-    parser.add_argument("artifact_folder", type=str, help="Path to the folder containing unzipped artifacts")
+    parser.add_argument("--artifact_folder", type=str, help="Path to the folder containing unzipped artifacts")
     args = parser.parse_args()
 
     graphs = load_graphs(args.artifact_folder)