Fix to ExperimentalStep

Author: JosePizarro3

src/masterdata_parser_example/parser.py

@@ -1,24 +1,14 @@
-from bam_masterdata.datamodel.object_types import Instrument
+from bam_masterdata.datamodel.object_types import ExperimentalStep
 from bam_masterdata.parsing import AbstractParser
 
 
 class MasterdataParserExample(AbstractParser):
     def parse(self, files, collection, logger):
-        instrument_input = Instrument(
-            name="Example Input Instrument",
-            manufacturer="Example Manufacturer",
-            bam_oe="OE_VP.1",
-            bam_location_complete="UE_08_0_101",
-        )
-        instrument_input_id = collection.add(instrument_input)
-        instrument_output = Instrument(
-            name="Example Output Instrument",
-            manufacturer="Example Manufacturer",
-            bam_oe="OE_VP.1",
-            bam_location_complete="UE_08_0_101",
-        )
-        instrument_output_id = collection.add(instrument_output)
-        _ = collection.add_relationship(instrument_input_id, instrument_output_id)
+        synthesis = ExperimentalStep(name="Synthesis")
+        synthesis_id = collection.add(synthesis)
+        measurement = ExperimentalStep(name="Measurement")
+        measurement_id = collection.add(measurement)
+        _ = collection.add_relationship(synthesis_id, measurement_id)
         logger.info(
-            "Parsing finished: Added examples input and output instruments and their relation."
+            "Parsing finished: Added examples synthesis and measurement experimental steps."
         )

tests/test_parser.py

@@ -9,6 +9,6 @@ def test_parse(self, parser):
 
         assert len(collection.attached_objects) == 2
         objects = list(collection.attached_objects.values())
-        assert objects[0].name == "Example Input Instrument"
-        assert objects[1].name == "Example Output Instrument"
+        assert objects[0].name == "Synthesis"
+        assert objects[1].name == "Measurement"
         assert len(collection.relationships) == 1