@@ -69,69 +69,68 @@ var cellposeExtension = new Extension(
6969extensionList. add(cellposeExtension)
7070
7171
72- // ------------------------ ABBA EXTENSION
73-
74- def abbaTagList = [" 0.4.0" ]
75- def abbaVersionList = []
76- abbaTagList. each{tag ->
77- var abbaRelease = new Release (
72+ // ------------------------ WARPY EXTENSION
73+ def warpyTagList = [" 0.4.2" ]
74+ def warpyVersionList = []
75+ warpyTagList. each{tag ->
76+ var warpyRelease = new Release (
7877 " v" + tag,
79- new URI (gh_biop_url + " qupath-extension-abba /releases/download/" + tag+ " /qupath-extension-abba- " + tag+ " .jar" ),
78+ new URI (gh_biop_url + " qupath-extension-warpy /releases/download/" + tag+ " /qupath-extension-warpy- " + tag+ " .jar" ),
8079 List . of(new URI (mvn_sj_url + " net/imglib2/imglib2-realtransform/" + imglib2_realtransform_version+ " /imglib2-realtransform-" + imglib2_realtransform_version+ " .jar" ), // real-transform
8180 new URI (mvn_central_url+ " net/imglib2/imglib2/" + imglib2_version+ " /imglib2-" + imglib2_version+ " .jar" ), // imglib2
8281 new URI (mvn_sj_url + " jitk/jitk-tps/" + jitk_tps_version+ " /jitk-tps-" + jitk_tps_version+ " .jar" ), // jitk-tps
8382 new URI (mvn_central_url+ " com/googlecode/efficient-java-matrix-library/ejml/" + ejml_version+ " /ejml-" + ejml_version+ " .jar" ), // ejml
84- new URI (mvn_central_url+ " gov/nist/math/jama/" + jama_version+ " /jama-" + jama_version+ " .jar" ), // jama
85- new URI (gh_biop_url + " qupath-extension-warpy/releases/download/" + tag+ " /qupath-extension-warpy-" + tag+ " .jar" ) // warpy
86-
83+ new URI (mvn_central_url+ " gov/nist/math/jama/" + jama_version+ " /jama-" + jama_version+ " .jar" ) // jama
8784 ),
8885 null ,
8986 null ,
9087 qupathMinVersionRange
9188 )
9289
93- abbaVersionList . add(abbaRelease )
90+ warpyVersionList . add(warpyRelease )
9491}
95- var abbaExtension = new Extension (
96- " QuPath ABBA extension" ,
97- " QuPath extension to use Aligning Big Brain and Atlases " ,
92+ var warpyExtension = new Extension (
93+ " QuPath Warpy extension" ,
94+ " Warpy - QuPath extension that supports transformations (affine, spline) of images. " ,
9895 " BIOP" ,
99- new URI (" https://github.com/BIOP/qupath-extension-abba " ),
96+ new URI (" https://github.com/BIOP/qupath-extension-warpy " ),
10097 false ,
101- abbaVersionList
98+ warpyVersionList
10299)
103- extensionList. add(abbaExtension )
100+ extensionList. add(warpyExtension )
104101
105- // ------------------------ WARPY EXTENSION
106- def warpyTagList = [" 0.4.2" ]
107- def warpyVersionList = []
108- warpyTagList. each{tag ->
109- var warpyRelease = new Release (
102+
103+ // ------------------------ ABBA EXTENSION
104+ def abbaTagList = [" 0.4.0" ]
105+ def abbaVersionList = []
106+ abbaTagList. each{tag ->
107+ var abbaRelease = new Release (
110108 " v" + tag,
111- new URI (gh_biop_url + " qupath-extension-warpy /releases/download/" + tag+ " /qupath-extension-warpy- " + tag+ " .jar" ),
109+ new URI (gh_biop_url + " qupath-extension-abba /releases/download/" + tag+ " /qupath-extension-abba- " + tag+ " .jar" ),
112110 List . of(new URI (mvn_sj_url + " net/imglib2/imglib2-realtransform/" + imglib2_realtransform_version+ " /imglib2-realtransform-" + imglib2_realtransform_version+ " .jar" ), // real-transform
113111 new URI (mvn_central_url+ " net/imglib2/imglib2/" + imglib2_version+ " /imglib2-" + imglib2_version+ " .jar" ), // imglib2
114112 new URI (mvn_sj_url + " jitk/jitk-tps/" + jitk_tps_version+ " /jitk-tps-" + jitk_tps_version+ " .jar" ), // jitk-tps
115113 new URI (mvn_central_url+ " com/googlecode/efficient-java-matrix-library/ejml/" + ejml_version+ " /ejml-" + ejml_version+ " .jar" ), // ejml
116- new URI (mvn_central_url+ " gov/nist/math/jama/" + jama_version+ " /jama-" + jama_version+ " .jar" ) // jama
114+ new URI (mvn_central_url+ " gov/nist/math/jama/" + jama_version+ " /jama-" + jama_version+ " .jar" ), // jama
115+ new URI (gh_biop_url + " qupath-extension-warpy/releases/download/" + warpyTagList[0 ]+ " /qupath-extension-warpy-" + tag+ " .jar" ) // warpy
116+
117117 ),
118118 null ,
119119 null ,
120120 qupathMinVersionRange
121121 )
122122
123- warpyVersionList . add(warpyRelease )
123+ abbaVersionList . add(abbaRelease )
124124}
125- var warpyExtension = new Extension (
126- " QuPath Warpy extension" ,
127- " Warpy - QuPath extension that supports transformations (affine, spline) of images. " ,
125+ var abbaExtension = new Extension (
126+ " QuPath ABBA extension" ,
127+ " QuPath extension to use Aligning Big Brain and Atlases " ,
128128 " BIOP" ,
129- new URI (" https://github.com/BIOP/qupath-extension-warpy " ),
129+ new URI (" https://github.com/BIOP/qupath-extension-abba " ),
130130 false ,
131- warpyVersionList
131+ abbaVersionList
132132)
133- extensionList. add(warpyExtension)
134-
133+ extensionList. add(abbaExtension)
135134
136135// spotiflow extension
137136/* def spotiflowTagList = ["v0.2.0"]
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