-
Notifications
You must be signed in to change notification settings - Fork 40
Description
my bash.rc file:
export nnUNet_codebase="/home/dozkan23/cluster/3D-TransUNet”
export nnUNet_raw_data_base="/home/dozkan23/cluster/nnUNet_raw”
export nnUNet_preprocessed="/home/dozkan23/cluster/nnUNet_preprocessed”
export RESULTS_FOLDER="/home/dozkan23/cluster/nnUNet_results”
error:
Traceback (most recent call last): File "/home/dozkan23/.conda/envs/clean/bin/nnUNet_plan_and_preprocess", line 33, in sys.exit(load_entry_point('nnunet', 'console_scripts', 'nnUNet_plan_and_preprocess')()) File "/home/dozkan23/cluster/trans_nnunet/nnUNet/nnunet/experiment_planning/nnUNet_plan_and_preprocess.py", line 102, in main task_name = convert_id_to_task_name(i) File "/home/dozkan23/cluster/trans_nnunet/nnUNet/nnunet/utilities/task_name_id_conversion.py", line 51, in convert_id_to_task_name raise RuntimeError("Could not find a task with the ID %d. Make sure the requested task ID exists and that " RuntimeError: Could not find a task with the ID 1.
Make sure the requested task ID exists and that nnU-Net knows where raw and preprocessed data are located (see Documentation - Installation).
Here are your currently defined folders:
nnUNet_preprocessed=/home/dozkan23/cluster/nnUNet_preprocessed
RESULTS_FOLDER=/home/dozkan23/cluster/nnUNet_results
nnUNet_raw_data_base=/home/dozkan23/cluster/nnUNet_raw
my command: (clean) [dozkan23@login01 cluster]$ nnUNet_plan_and_preprocess -t 001
my folder placement is on the image
example path of my dataset: /home/dozkan23/cluster/nnUNet_raw/Task002_MNG
