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lines changed Original file line number Diff line number Diff line change 11<?xml version =" 1.0" encoding =" UTF-8"
22<sbml xmlns =" http://www.sbml.org/sbml/level3/version2/core" level =" 3" version =" 2"
3- <model metaid = " Liu_IFACPapersOnLine2025_individual " id =" Liu_IFACPapersOnLine2025_individual" name =" Liu_IFACPapersOnLine2025_individual"
3+ <model id =" Liu_IFACPapersOnLine2025_individual" name =" Liu_IFACPapersOnLine2025_individual"
44 <annotation >
55 <rdf : RDF xmlns : rdf =" http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns : dc =" http://purl.org/dc/elements/1.1/" xmlns : dcterms =" http://purl.org/dc/terms/" xmlns : vCard =" http://www.w3.org/2001/vcard-rdf/3.0#" xmlns : bqbiol =" http://biomodels.net/biology-qualifiers/" xmlns : bqmodel =" http://biomodels.net/model-qualifiers/"
66 <rdf : Description rdf : about =" #benchmark_models_petab"
Original file line number Diff line number Diff line change 11<?xml version =" 1.0" encoding =" UTF-8"
22<sbml xmlns =" http://www.sbml.org/sbml/level3/version2/core" level =" 3" version =" 2"
3- <model metaid = " Liu_IFACPapersOnLine2025 " id =" Liu_IFACPapersOnLine2025" name =" Liu_IFACPapersOnLine2025"
3+ <model id =" Liu_IFACPapersOnLine2025" name =" Liu_IFACPapersOnLine2025"
44 <annotation >
55 <rdf : RDF xmlns : rdf =" http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns : dc =" http://purl.org/dc/elements/1.1/" xmlns : dcterms =" http://purl.org/dc/terms/" xmlns : vCard =" http://www.w3.org/2001/vcard-rdf/3.0#" xmlns : bqbiol =" http://biomodels.net/biology-qualifiers/" xmlns : bqmodel =" http://biomodels.net/model-qualifiers/"
66 <rdf : Description rdf : about =" #benchmark_models_petab"
Original file line number Diff line number Diff line change @@ -33,7 +33,7 @@ A sortable version of the table is available
3333| [ Isensee_JCB2018] ( Benchmark-Models/Isensee_JCB2018/ ) | 123 | 46 | 0 | ✓ | 1 | 0 | 687 | 3 | normal | parameterScaleNormal | 25 | [ \[ 1\] ] ( http://identifiers.org/doi/10.1083/jcb.201708053 ) | [ \[ 1\] ] ( https://sbml4humans.de/model_url?url=https://raw.githubusercontent.com/Benchmarking-Initiative/Benchmark-Models-PEtab/master/Benchmark-Models/Isensee_JCB2018/model_Isensee_JCB2018.xml ) |
3434| [ Lang_PLOSComputBiol2024] ( Benchmark-Models/Lang_PLOSComputBiol2024/ ) | 1 | 294 | 0 | | 0 | 0 | 9600 | 16 | normal | laplace; uniform | 124 | [ \[ 1\] ] ( http://identifiers.org/doi/10.1371/journal.pcbi.1011151 ) | [ \[ 1\] ] ( https://sbml4humans.de/model_url?url=https://raw.githubusercontent.com/Benchmarking-Initiative/Benchmark-Models-PEtab/master/Benchmark-Models/Lang_PLOSComputBiol2024/model_Lang_PLOSComputBiol2024.xml ) |
3535| [ Laske_PLOSComputBiol2019] ( Benchmark-Models/Laske_PLOSComputBiol2019/ ) | 3 | 13 | 0 | | 0 | 0 | 42 | 13 | normal; log-normal | | 41 | [ \[ 1\] ] ( http://identifiers.org/biomodels.db/BIOMD0000000463 ) [ \[ 2\] ] ( http://identifiers.org/biomodels.db/MODEL1307270000 ) [ \[ 3\] ] ( http://identifiers.org/doi/10.1371/journal.pcbi.1006944 ) | [ \[ 1\] ] ( https://sbml4humans.de/model_url?url=https://raw.githubusercontent.com/Benchmarking-Initiative/Benchmark-Models-PEtab/master/Benchmark-Models/Laske_PLOSComputBiol2019/model_Laske_PLOSComputBiol2019.xml ) |
36- | [ Liu_IFACPapersOnLine2025] ( Benchmark-Models/Liu_IFACPapersOnLine2025/ ) | 2 | 9 | 1 | ✓ | 0 | 0 | 100 | 1 | normal | | 0 | | [ \[ 1\] ] ( https://sbml4humans.de/model_url?url=https://raw.githubusercontent.com/Benchmarking-Initiative/Benchmark-Models-PEtab/master/Benchmark-Models/Liu_IFACPapersOnLine2025/model.xml ) |
36+ | [ Liu_IFACPapersOnLine2025] ( Benchmark-Models/Liu_IFACPapersOnLine2025/ ) | 2 | 9 | 1 | ✓ | 0 | 0 | 100 | 1 | normal | | 0 | [ \[ 1 \] ] ( http://identifiers.org/doi/10.1016/j.ifacol.2025.07.160 ) | [ \[ 1\] ] ( https://sbml4humans.de/model_url?url=https://raw.githubusercontent.com/Benchmarking-Initiative/Benchmark-Models-PEtab/master/Benchmark-Models/Liu_IFACPapersOnLine2025/model.xml ) |
3737| [ Lucarelli_CellSystems2018] ( Benchmark-Models/Lucarelli_CellSystems2018/ ) | 16 | 84 | 0 | | 0 | 0 | 1755 | 65 | normal; log10-normal | | 33 | [ \[ 1\] ] ( http://identifiers.org/doi/10.1016/j.cels.2017.11.010 ) | [ \[ 1\] ] ( https://sbml4humans.de/model_url?url=https://raw.githubusercontent.com/Benchmarking-Initiative/Benchmark-Models-PEtab/master/Benchmark-Models/Lucarelli_CellSystems2018/model_Lucarelli_CellSystems2018.xml ) |
3838| [ Okuonghae_ChaosSolitonsFractals2020] ( Benchmark-Models/Okuonghae_ChaosSolitonsFractals2020/ ) | 1 | 16 | 0 | | 0 | 0 | 92 | 2 | normal | | 9 | [ \[ 1\] ] ( http://identifiers.org/doi/10.1016/j.chaos.2020.110032 ) | [ \[ 1\] ] ( https://sbml4humans.de/model_url?url=https://raw.githubusercontent.com/Benchmarking-Initiative/Benchmark-Models-PEtab/master/Benchmark-Models/Okuonghae_ChaosSolitonsFractals2020/model_Okuonghae_ChaosSolitonsFractals2020.xml ) |
3939| [ Oliveira_NatCommun2021] ( Benchmark-Models/Oliveira_NatCommun2021/ ) | 1 | 12 | 0 | ✓ | 0 | 0 | 120 | 2 | normal | | 9 | [ \[ 1\] ] ( http://identifiers.org/doi/10.1038/s41467-020-19798-3 ) | [ \[ 1\] ] ( https://sbml4humans.de/model_url?url=https://raw.githubusercontent.com/Benchmarking-Initiative/Benchmark-Models-PEtab/master/Benchmark-Models/Oliveira_NatCommun2021/Oliveira_NatCommun2021_model.xml ) |
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