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[pre-commit.ci] auto fixes from pre-commit.com hooks
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+23
-18
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2 files changed

+23
-18
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src/napari_clusters_plotter/_new_plotter_widget.py

Lines changed: 0 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -477,4 +477,3 @@ def _apply_layer_color(layer, colors):
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layer.colormap = DirectLabelColormap(color_dict=color_dict)
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layer.refresh()
480-

src/napari_clusters_plotter/_tests/test_plotter.py

Lines changed: 23 additions & 17 deletions
Original file line numberDiff line numberDiff line change
@@ -72,28 +72,30 @@ def create_multi_vectors_layer(n_samples: int = 100):
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def create_multi_surface_layer(n_samples: int = 100):
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from napari.layers import Surface
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75+
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vertices1, vertices2 = create_multi_point_layer(n_samples=n_samples)
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faces1 = []
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faces2 = []
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for t in range(int(vertices1.data[:, 0].max())):
81-
vertex_indeces_t = np.argwhere(
82-
vertices1.data[:, 0] == t
83-
).flatten()
81+
vertex_indeces_t = np.argwhere(vertices1.data[:, 0] == t).flatten()
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# draw some random triangles from the indeces
86-
_faces = np.random.randint(low=vertex_indeces_t.min(),
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high=vertex_indeces_t.max(), size=(10, 3))
84+
_faces = np.random.randint(
85+
low=vertex_indeces_t.min(),
86+
high=vertex_indeces_t.max(),
87+
size=(10, 3),
88+
)
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faces1.append(_faces)
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90-
vertex_indeces_t = np.argwhere(
91-
vertices2.data[:, 0] == t
92-
).flatten()
91+
vertex_indeces_t = np.argwhere(vertices2.data[:, 0] == t).flatten()
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# draw some random triangles from the indeces
95-
_faces = np.random.randint(low=vertex_indeces_t.min(),
96-
high=vertex_indeces_t.max(), size=(10, 3))
94+
_faces = np.random.randint(
95+
low=vertex_indeces_t.min(),
96+
high=vertex_indeces_t.max(),
97+
size=(10, 3),
98+
)
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faces2.append(_faces)
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faces1 = np.concatenate(faces1, axis=0)
@@ -153,15 +155,17 @@ def create_multi_shapes_layers(n_samples: int = 100):
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shapes2.append(shape2)
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shape1 = Shapes(shapes1, features=points1.features, name="shapes1")
156-
shape2 = Shapes(shapes2, features=points2.features, name="shapes2", translate=(0, 2))
158+
shape2 = Shapes(
159+
shapes2, features=points2.features, name="shapes2", translate=(0, 2)
160+
)
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return shape1, shape2
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def create_multi_labels_layer():
162-
from skimage import data, measure
163-
from napari.layers import Labels
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import pandas as pd
167+
from napari.layers import Labels
168+
from skimage import data, measure
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labels1 = measure.label(data.binary_blobs(length=64, n_dim=2))
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labels2 = measure.label(data.binary_blobs(length=64, n_dim=2))
@@ -183,7 +187,9 @@ def create_multi_labels_layer():
183187
)
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185189
labels1 = Labels(labels1, name="labels1", features=features1)
186-
labels2 = Labels(labels2, name="labels2", features=features2, translate=(0, 128))
190+
labels2 = Labels(
191+
labels2, name="labels2", features=features2, translate=(0, 128)
192+
)
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return labels1, labels2
189195

@@ -219,7 +225,7 @@ def test_mixed_layers(make_napari_viewer):
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create_multi_labels_layer,
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create_multi_vectors_layer,
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create_multi_surface_layer,
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create_multi_shapes_layers
228+
create_multi_shapes_layers,
223229
],
224230
)
225231
def test_cluster_memorization(make_napari_viewer, create_sample_layers):
@@ -264,7 +270,7 @@ def test_cluster_memorization(make_napari_viewer, create_sample_layers):
264270
create_multi_labels_layer,
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create_multi_vectors_layer,
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create_multi_surface_layer,
267-
create_multi_shapes_layers
273+
create_multi_shapes_layers,
268274
],
269275
)
270276
def test_categorical_handling(make_napari_viewer, create_sample_layers):

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