diff --git a/src/ontology/idpo-edit.owl b/src/ontology/idpo-edit.owl index 85e7a47..e399aff 100644 --- a/src/ontology/idpo-edit.owl +++ b/src/ontology/idpo-edit.owl @@ -121,30 +121,6 @@ Declaration(AnnotationProperty(rdfs:label)) # Annotation Properties ############################ -# Annotation Property: (example of usage) - -AnnotationAssertion(rdfs:label "example of usage") - -# Annotation Property: (definition) - -AnnotationAssertion(rdfs:label "definition") - -# Annotation Property: (has ontology root term) - -AnnotationAssertion(rdfs:label "has ontology root term") - -# Annotation Property: (abbreviation) - -AnnotationAssertion(rdfs:label "abbreviation") - -# Annotation Property: (database_cross_reference) - -AnnotationAssertion(rdfs:label "database_cross_reference") - -# Annotation Property: (has_obo_format_version) - -AnnotationAssertion(rdfs:label "has_obo_format_version") - # Annotation Property: (has_obo_namespace) AnnotationAssertion(rdfs:label "has_obo_namespace") @@ -166,18 +142,6 @@ AnnotationAssertion(rdfs:label "ha ObjectPropertyDomain( ) ObjectPropertyRange( ) -# Object Property: (has quality) - -AnnotationAssertion(rdfs:label "has quality") - -# Object Property: (has input) - -AnnotationAssertion(rdfs:label "has input"@en) - -# Object Property: (has output) - -AnnotationAssertion(rdfs:label "has output") - ############################ @@ -703,7 +667,7 @@ SubClassOf( (self activation) -AnnotationAssertion( "A self-regulatory mechanism in which intramolecular interactions induce or enhance the functional activity of a protein.") +AnnotationAssertion( "A self regulatory mechanism in which intramolecular interactions induce or enhance the functional activity of a protein.") AnnotationAssertion( "autoactivation") AnnotationAssertion( "self-activation") AnnotationAssertion( "disorder_function") @@ -713,7 +677,7 @@ SubClassOf( (self inhibition) -AnnotationAssertion( "A self-regulatory mechanism in which intramolecular interactions repress or prevent the functional activity of a protein.") +AnnotationAssertion( "A self regulatory mechanism in which intramolecular interactions repress or prevent the functional activity of a protein.") AnnotationAssertion( "autoinhibition") AnnotationAssertion( "self-inhibition") AnnotationAssertion( "disorder_function") @@ -783,7 +747,7 @@ SubClassOf( ObjectSomeValuesFrom( (protein aggregate formation) -AnnotationAssertion(Annotation( "PMID:33510441") "Process involving a non-native state of a protein in which isoluble intermolecular interactions are established to form a higher-order irreversible assembly, usually as result of aberrant liquid-liquid phase separation.") +AnnotationAssertion(Annotation( "PMID:33510441") "Process involving a non-native state of a protein in which insoluble intermolecular interactions are established to form a higher-order irreversible assembly, usually as result of aberrant liquid-liquid phase separation.") AnnotationAssertion( ) AnnotationAssertion( "PMID:38825008") AnnotationAssertion( "aggregate assembly")