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TANDEM:15-12-15: Fixed cmd line missing arg
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tandem/15-12-15-2/Dockerfile

Lines changed: 4 additions & 3 deletions
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@@ -4,7 +4,7 @@ FROM biocontainers/biocontainers:v1.0.0_cv4
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################## METADATA ######################
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LABEL base_image="biocontainers:v1.0.0_cv4"
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LABEL version="3"
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LABEL version="4"
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LABEL software="X!Tandem"
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LABEL software.version="15-12-15-2"
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LABEL about.summary="software that can match tandem mass spectra with peptide sequences"
@@ -21,8 +21,9 @@ MAINTAINER Felipe da Veiga Leprevost <[email protected]>
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RUN ZIP=tandem-linux-15-12-15-2.zip && \
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wget https://github.com/BioDocker/software-archive/releases/download/X!Tandem/$ZIP -O /tmp/$ZIP && \
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unzip /tmp/$ZIP -d /home/biodocker/bin/ && \
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rm /tmp/$ZIP && \
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bash -c 'echo -e "#!/bin/bash\n/home/biodocker/bin/tandem-linux-15-12-15-2/bin/tandem.exe $@"' > /home/biodocker/bin/tandem && \
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rm /tmp/$ZIP
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RUN bash -c 'echo -e "#!/bin/bash\n/home/biodocker/bin/tandem-linux-15-12-15-2/bin/tandem.exe \$@"' > /home/biodocker/bin/tandem && \
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chmod 755 /home/biodocker/bin/tandem
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ENV PATH /home/biodocker/bin:$PATH

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