Merge pull request #300 from jgriss/master

Adds X!Tandem 17-02-01-4

Author: ypriverol

tandem/17-02-01-4/Dockerfile

@@ -0,0 +1,35 @@
+
+################## BASE IMAGE ######################
+FROM biocontainers/biocontainers:v1.0.0_cv4
+
+################## METADATA ######################
+LABEL base_image="biocontainers:v1.0.0_cv4"
+LABEL version="4"
+LABEL software="tandem"
+LABEL software.version="17-02-01-4"
+LABEL about.summary="software that can match tandem mass spectra with peptide sequences"
+LABEL about.home="http://www.thegpm.org/tandem/"
+LABEL about.documentation="http://www.thegpm.org/tandem/"
+LABEL about.license_file="http://www.thegpm.org/tandem/"
+LABEL about.license="SPDX:Artistic-2.0"
+LABEL about.tags="Proteomics"
+LABEL extra.identifiers.biotools="xtandem"
+
+################## MAINTAINER ######################
+MAINTAINER Johannes Griss <[email protected]>
+
+RUN ZIP=tandem-linux-17-02-01-4.zip && \
+  wget "ftp://ftp.thegpm.org/projects/tandem/source/${ZIP}" -O /tmp/$ZIP && \
+  # wget https://github.com/BioDocker/software-archive/releases/download/X!Tandem/$ZIP -O /tmp/$ZIP && \
+  unzip /tmp/$ZIP -d /home/biodocker/bin/ && \
+  chmod 755 /home/biodocker/bin/tandem-linux-17-02-01-4/bin/tandem.exe && \
+  rm /tmp/$ZIP
+
+RUN bash -c 'echo -e "#!/bin/bash\n/home/biodocker/bin/tandem-linux-17-02-01-4/bin/tandem.exe \$@"' > /home/biodocker/bin/tandem && \
+  chmod 755 /home/biodocker/bin/tandem
+
+ENV PATH /home/biodocker/bin:$PATH
+
+USER biodocker
+
+WORKDIR /data/