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SPECTRA-CLUSTER-CLI:1.1.2 Fixed missing arg in cmd line
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spectra-cluster-cli/v1.1.2/Dockerfile

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@@ -3,7 +3,7 @@ FROM biocontainers/biocontainers:v1.0.0_cv4
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################## METADATA ######################
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LABEL base_image="biocontainers:v1.0.0_cv4"
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LABEL version="2"
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LABEL version="3"
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LABEL software="spectra-cluster-cli"
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LABEL software.version="v1.1.2"
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LABEL about.summary="PRIDE Cluster algorithm to cluster heterogeneous mass spectra"
@@ -21,7 +21,7 @@ RUN VERSION=1.1.2 && \
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wget https://github.com/spectra-cluster/spectra-cluster-cli/releases/download/spectra-cluster-cli-${VERSION}/$ZIP -O /tmp/$ZIP && \
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unzip /tmp/$ZIP -d /home/biodocker/bin/ && \
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rm /tmp/$ZIP && \
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echo -e '#!/bin/bash\njava -jar /home/biodocker/bin/spectra-cluster-cli-1.1.2.jar $@' > /home/biodocker/bin/spectra-cluster-cli && \
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bash -c "echo -e '#!/bin/bash\njava -jar /home/biodocker/bin/spectra-cluster-cli-1.1.2.jar \$@'" > /home/biodocker/bin/spectra-cluster-cli && \
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chmod +x /home/biodocker/bin/spectra-cluster-cli
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ENV PATH /home/biodocker/bin/spectra-cluster-cli:$PATH

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