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Fix Mod_Prep_TF
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R/Mod_Postprocess.R

Lines changed: 10 additions & 12 deletions
Original file line numberDiff line numberDiff line change
@@ -453,9 +453,7 @@ Mod_Prep_TF <- function(
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# Path to store TF commands
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Path_TF <- IASDT.R::Path(Path_Model, "TF_postprocess")
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# Path to store log files
456-
Path_Log <- IASDT.R::NormalizePath(
457-
IASDT.R::Path(Path_TF, "log", "%x-%A-%a.out"))
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Path_Log <- IASDT.R::NormalizePath(IASDT.R::Path(Path_TF, "log"))
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fs::dir_create(c(Path_TF, Path_Log))
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# ****************************************************************
@@ -473,9 +471,9 @@ Mod_Prep_TF <- function(
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Path_VP_SLURM <- IASDT.R::Path(Path_TF, "VP_SLURM.slurm")
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Path_VP_Commands <- IASDT.R::Path(Path_TF, "VP_Commands.txt")
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476-
# Merge and organize TF commands for computing variance partitioning ----
474+
# Merge and organize TensorFlow commands for computing variance partitioning
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IASDT.R::CatTime(
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"Merge and organize TF commands for computing variance partitioning",
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"Merge and organize TF TensorFlow for computing variance partitioning",
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Level = 1, Time = FALSE)
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# Find list of files matching the pattern
@@ -505,8 +503,8 @@ Mod_Prep_TF <- function(
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"#SBATCH --gpus-per-node=1",
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paste0("#SBATCH --time=", VP_Time),
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paste0("#SBATCH --partition=", Partition_Name),
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paste0("#SBATCH --output=", Path_Log),
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paste0("#SBATCH --error=", Path_Log),
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paste0("#SBATCH --output=", IASDT.R::Path(Path_Log, "%x-%A-%a.out")),
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paste0("#SBATCH --error=", IASDT.R::Path(Path_Log, "%x-%A-%a.out")),
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paste0("#SBATCH --array=1-", length(VP_InFiles)),
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"\n# File containing commands to be executed",
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paste0("File=", Path_VP_Commands),
@@ -552,11 +550,11 @@ Mod_Prep_TF <- function(
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# both can be run on the same time.
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NumFiles <- NumFiles - length(VP_InFiles)
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555-
# Merge and organize TF commands for LF predictions ----
553+
# Merge and organize TensorFlow commands for LF predictions ----
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IASDT.R::CatTime(
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paste0(
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"Merge and organize TF commands for LF predictions into a maximum of ",
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NumFiles, " files"),
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"Merge and organize TensorFlow commands for LF predictions ",
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"into a maximum of ", NumFiles, " files"),
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Level = 1, Time = FALSE)
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# Basic commands for TensorFlow setup
@@ -667,8 +665,8 @@ Mod_Prep_TF <- function(
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"#SBATCH --gpus-per-node=1",
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paste0("#SBATCH --time=", LF_Time),
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paste0("#SBATCH --partition=", Partition_Name),
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paste0("#SBATCH --output=", Path_Log),
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paste0("#SBATCH --error=", Path_Log),
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paste0("#SBATCH --output=", IASDT.R::Path(Path_Log, "%x-%A-%a.out")),
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paste0("#SBATCH --error=", IASDT.R::Path(Path_Log, "%x-%A-%a.out")),
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paste0("#SBATCH --array=1-", NumFiles),
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"",
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"# Define directories",

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