rename collection to sample type

Author: sunray1

src/biorepo_components/BiorepoAboutSamplesContent.jsx

@@ -18,22 +18,22 @@ export default function BiorepoAboutSamplesContent() {
           <Card variant="outlined">
             <CardMedia
               component="img"
-              image="../images/card-images/1D8A2197.jpg"
-              title="Repositories"
+              image="../images/card-images/1D8A2241.jpg"
+              title="Collections"
               height="auto"
               loading="lazy"
             />
             <CardContent>
               <Typography variant="h5">
-                Sample Repositories
+                Sample Types
               </Typography>
               <Typography variant="body2" color="textSecondary" component="p" style={{ fontSize: '1rem' }}>
-                Although the NEON Biorepository is the primary facility housing NEON samples, select specimens are held by other institutions. Requests for these samples should be made directly to the hosting organization.
+                Explore the range of sample types archived at the Biorepository, including soils, organisms (whole and subsampled), and genomic extracts.
               </Typography>
             </CardContent>
             <CardActions>
-              <Button variant="outlined" size="large" endIcon={<RightIcon />} href="https://www.neonscience.org/samples/sample-repositories">
-                List Repositories
+              <Button variant="outlined" size="large" endIcon={<RightIcon />} href="../collections/misc/browsecollprofiles.php">
+                View Samples Types
               </Button>
             </CardActions>
           </Card>
@@ -42,22 +42,22 @@ export default function BiorepoAboutSamplesContent() {
           <Card variant="outlined">
             <CardMedia
               component="img"
-              image="../images/card-images/1D8A2241.jpg"
-              title="Collections"
+              image="../images/card-images/1D8A2197.jpg"
+              title="Repositories"
               height="auto"
               loading="lazy"
             />
             <CardContent>
               <Typography variant="h5">
-                Browse Sample Collections
+                Other Sample Repositories
               </Typography>
               <Typography variant="body2" color="textSecondary" component="p" style={{ fontSize: '1rem' }}>
-                NEON samples in the sample portal are organized into collections. These generally correspond to the types of samples collected. Data and statistics about these collections can be found here.
+                Although the NEON Biorepository is the primary facility housing NEON samples, select specimens are held by other institutions. Requests for these samples should be made directly to the hosting organization.
               </Typography>
             </CardContent>
             <CardActions>
-              <Button variant="outlined" size="large" endIcon={<RightIcon />} href="../collections/misc/browsecollprofiles.php">
-                Explore Samples Types
+              <Button variant="outlined" size="large" endIcon={<RightIcon />} href="https://www.neonscience.org/samples/sample-repositories">
+                List of Repositories
               </Button>
             </CardActions>
           </Card>

src/biorepo_components/BiorepoCollectionsContent.jsx

@@ -128,11 +128,11 @@ export default function BiorepoCollectionsContent() {
     <div>
       <Box sx={{ width: '100%' }}>
         <Typography variant="h3">
-          Browse Collection Profiles
+          Browse Sample Types
         </Typography>
         <Box sx={{ paddingTop: '30px', paddingBottom: '30px' }}>
           <Typography variant="body1">
-            NEON samples are organized into collections, which generally correspond to the types of samples collected based on NEON protocols and sample classes. It is strongly recommended to read the corresponding protocol to understand how and why the collections are organized as they are. Collections are displayed in various groupings via the tabs below. Click on any collection to view detailed data, records, and statistics.
+            Use the tabs and dropdowns to explore the types of samples NEON offers, and view their data, records, and statistics.
           </Typography>
         </Box>
       </Box>
@@ -146,24 +146,24 @@ export default function BiorepoCollectionsContent() {
             aria-label="collections-tabs"
             variant="fullWidth"
           >
-            <Tab label="Browse by Taxonomic Group" {...a11yProps(0)} />
-            <Tab label="Browse by Sample Type" {...a11yProps(1)} />
-            <Tab label="Browse by Protocol" {...a11yProps(2)} />
+            <Tab label="Organized by Taxonomic Group" {...a11yProps(0)} />
+            <Tab label="Organized by Protocol" {...a11yProps(2)} />
+            <Tab label="Organized by Preservation Method" {...a11yProps(1)} />
           </Tabs>
         </Box>
         <CustomTabPanel value={value} index={0}>
           <div>
             {renderNode(taxonomicNodesData)}
           </div>
         </CustomTabPanel>
-        <CustomTabPanel value={value} index={1}>
+        <CustomTabPanel value={value} index={2}>
           <div>
-            {renderNode(sampletypeNodesData)}
+            {renderNode(protocolNodesData)}
           </div>
         </CustomTabPanel>
-        <CustomTabPanel value={value} index={2}>
+        <CustomTabPanel value={value} index={1}>
           <div>
-            {renderNode(protocolNodesData)}
+            {renderNode(sampletypeNodesData)}
           </div>
         </CustomTabPanel>
       </Box>