@@ -2237,14 +2237,10 @@ def find_overlaps(
22372237 num_threads ,
22382238 )
22392239
2240- print (all_s_hits , all_q_hits )
22412240 if ignore_strand is False :
2242- print (self ._strand , query ._strand )
22432241 s_strands = self ._strand [all_s_hits ]
22442242 q_strands = query ._strand [all_q_hits ]
22452243
2246- print (s_strands , q_strands )
2247-
22482244 mask = s_strands == q_strands
22492245 # to allow '*' with any strand from query
22502246 mask [s_strands == 0 ] = True
@@ -2446,8 +2442,6 @@ def nearest(
24462442 self_subset = self [s_group ]
24472443 query_subset = query [q_group ]
24482444 res_idx = self_subset ._ranges .nearest (query = query_subset ._ranges , select = "all" , delete_index = False )
2449- print (s_group , q_group )
2450- print (res_idx )
24512445
24522446 _q_hits = np .asarray ([q_group [j ] for j in res_idx .get_column ("query_hits" )])
24532447 _s_hits = np .asarray ([s_group [x ] for x in res_idx .get_column ("self_hits" )])
@@ -2515,8 +2509,6 @@ def precede(
25152509 self_subset = self [s_group ]
25162510 query_subset = query [q_group ]
25172511 res_idx = self [s_group ]._ranges .precede (query = query [q_group ]._ranges , select = "all" )
2518- print (s_group , q_group )
2519- print (res_idx )
25202512
25212513 _q_hits = np .asarray ([q_group [j ] for j in res_idx .get_column ("query_hits" )])
25222514 _s_hits = np .asarray ([s_group [x ] for x in res_idx .get_column ("self_hits" )])
@@ -2585,8 +2577,6 @@ def follow(
25852577 self_subset = self [s_group ]
25862578 query_subset = query [q_group ]
25872579 res_idx = self [s_group ]._ranges .precede (query = query [q_group ]._ranges , select = "all" )
2588- print (s_group , q_group )
2589- print (res_idx )
25902580
25912581 _q_hits = np .asarray ([q_group [j ] for j in res_idx .get_column ("query_hits" )])
25922582 _s_hits = np .asarray ([s_group [x ] for x in res_idx .get_column ("self_hits" )])
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