Run as root for install stage #343
almahmoudAnnotations
3 errors and 6 warnings
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build-arm64 (ghcr.io/bioconductor/rocker-cuda, 4.5.2-arm64, jupyterlab-ml)
buildx failed with: ERROR: failed to build: failed to solve: process "/bin/bash -euo pipefail -c bash /tmp/install_bioc_sysdeps.sh $BIOCONDUCTOR_VERSION && echo \"R_LIBS=/usr/local/lib/R/host-site-library:\\${R_LIBS}\" > /usr/local/lib/R/etc/Renviron.site && curl -OL http://bioconductor.org/checkResults/devel/bioc-LATEST/Renviron.bioc && sed -i '/^IS_BIOC_BUILD_MACHINE/d' Renviron.bioc && cat Renviron.bioc | grep -o '^[^#]*' | sed 's/export //g' >>/etc/environment && cat Renviron.bioc >> /usr/local/lib/R/etc/Renviron.site && echo BIOCONDUCTOR_VERSION=${BIOCONDUCTOR_VERSION} >> /usr/local/lib/R/etc/Renviron.site && echo BIOCONDUCTOR_DOCKER_VERSION=${BIOCONDUCTOR_DOCKER_VERSION} >> /usr/local/lib/R/etc/Renviron.site && echo 'LIBSBML_CFLAGS=\"-I/usr/include\"' >> /usr/local/lib/R/etc/Renviron.site && echo 'LIBSBML_LIBS=\"-lsbml\"' >> /usr/local/lib/R/etc/Renviron.site && rm -rf Renviron.bioc" did not complete successfully: exit code: 1
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build-amd64 (ghcr.io/bioconductor/rocker-cuda, 4.5.2-amd64, jupyterlab-ml)
buildx failed with: ERROR: failed to build: failed to solve: process "/bin/bash -o pipefail -c bash /tmp/install_bioc_sysdeps.sh $BIOCONDUCTOR_VERSION && echo \"R_LIBS=/usr/local/lib/R/host-site-library:\\${R_LIBS}\" > /usr/local/lib/R/etc/Renviron.site && curl -OL http://bioconductor.org/checkResults/devel/bioc-LATEST/Renviron.bioc && sed -i '/^IS_BIOC_BUILD_MACHINE/d' Renviron.bioc && cat Renviron.bioc | grep -o '^[^#]*' | sed 's/export //g' >>/etc/environment && cat Renviron.bioc >> /usr/local/lib/R/etc/Renviron.site && echo BIOCONDUCTOR_VERSION=${BIOCONDUCTOR_VERSION} >> /usr/local/lib/R/etc/Renviron.site && echo BIOCONDUCTOR_DOCKER_VERSION=${BIOCONDUCTOR_DOCKER_VERSION} >> /usr/local/lib/R/etc/Renviron.site && echo 'LIBSBML_CFLAGS=\"-I/usr/include\"' >> /usr/local/lib/R/etc/Renviron.site && echo 'LIBSBML_LIBS=\"-lsbml\"' >> /usr/local/lib/R/etc/Renviron.site && rm -rf Renviron.bioc" did not complete successfully: exit code: 1
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merge (jupyterlab-ml, amd64,arm64)
Unable to download artifact(s): Artifact not found for name: digests-jupyterlab-ml-amd64
Please ensure that your artifact is not expired and the artifact was uploaded using a compatible version of toolkit/upload-artifact.
For more information, visit the GitHub Artifacts FAQ: https://github.com/actions/toolkit/blob/main/packages/artifact/docs/faq.md
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merge (r-ver, amd64,arm64)
Attempt 1 failed. Reason: Child_process exited with error code 1
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merge (tidyverse, amd64)
Attempt 1 failed. Reason: Child_process exited with error code 1
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merge (bioconductor_docker, amd64,arm64)
Attempt 3 failed. Reason: Child_process exited with error code 1
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merge (bioconductor_docker, amd64,arm64)
Attempt 2 failed. Reason: Child_process exited with error code 1
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merge (bioconductor_docker, amd64,arm64)
Attempt 1 failed. Reason: Child_process exited with error code 1
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merge (shiny, amd64)
Attempt 1 failed. Reason: Child_process exited with error code 1
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Artifacts
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Bioconductor~bioconductor_docker~0HYENP.dockerbuild
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Bioconductor~bioconductor_docker~9BIGC5.dockerbuild
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176 KB |
sha256:b2d95d8d599ffc25b80e586d6acf35e0339c35bd87ba53602ef6413088de9cea
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Bioconductor~bioconductor_docker~NGPMGM.dockerbuild
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164 KB |
sha256:13f479125bffff51f65fa9b0459c43258b8b0385ef3719da82cc1be56c51ba8b
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Bioconductor~bioconductor_docker~OCZK1Q.dockerbuild
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163 KB |
sha256:3497db701430befec130f67c97076948880b8efce7fabffd1c48d7e7a7e6a206
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Bioconductor~bioconductor_docker~SIOIGA.dockerbuild
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167 KB |
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Bioconductor~bioconductor_docker~UL1QUC.dockerbuild
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165 KB |
sha256:34b9fc916fd50276d9945277eb7a11bfbd1e531be022ac149b37e0adcd8affd1
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Bioconductor~bioconductor_docker~XYE4RR.dockerbuild
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171 KB |
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Bioconductor~bioconductor_docker~Z6UPYI.dockerbuild
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156 KB |
sha256:125e293bd4fe19b49e39a05d53bf855120ce0c6bf159cd259311807590950587
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digests-bioconductor_docker-amd64
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244 Bytes |
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244 Bytes |
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digests-r-ver-amd64
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244 Bytes |
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244 Bytes |
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digests-tidyverse-amd64
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244 Bytes |
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