[EuroBioc2025] Package Demo: mia

[bioc-workshop-dev]

DO NOT INCLUDE REQUESTS IN THE FIRST COMMENT.
PLEASE POST THIS TEMPLATE UNCHANGED THEN FOLLOW ITS INSTRUCTIONS IN A NEW
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General Notes

This repository serves as a mostly automated pipeline for deploying workshops
to the Bioconductor Workshop.

Bot Commands

Issues in this repository are monitored to by a bot. All commands need to be
written on the first line of the comment, in a single line.

Example Docker Request

/request
  id='tidybioc2023'
  title='Tidy Transcriptomics'
  description='For Single-Cell RNA Sequencing Analyses'
  section='Smorgasbord 2023'
  source='https://github.com/tidytranscriptomics-workshops/bioc2023_tidytranscriptomics'
  docker='ghcr.io/tidytranscriptomics-workshops/bioc2023_tidytranscriptomics:latest'

Note. The example /request is on multiple lines for readability.

Additional Workshop Information

Expected Number of Participants: 0

Workshop Date(s): September 18, 2025 - September 18, 2025

Workshop Start Time (approx.): 13:45

[bioc-workshop-dev]

READ ONLY: DO NOT EDIT ## /request id="eurobioc2025demoworkshop" title="Package Demo: mia" description="miaverse – microbiome analysis framework within the SummarizedExperiment ecosystem" section="EuroBioc2025" startfile="vignettes/eurobioc2025.Rmd" source="https://github.com/microbiome/OMATutorials" docker="ghcr.io/microbiome/omatutorials:latest" pkglist="" vignettes=""

[almahmoud]

/test id="eurobioc2025workshopdemo" title="Workshop Demo" description="Adding a workshop to the production instance live" section="EuroBioc2025" startfile="vignettes/eurobioc2025.Rmd" source="https://github.com/microbiome/OMATutorials" docker="ghcr.io/microbiome/omatutorials:latest"

[almahmoud]

AUTO-GENERATED RESPONSE
Action Log
Your request has passed initial checks and is being built and/or deployed to the test instance.
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[almahmoud]

AUTO-GENERATED RESPONSE
Action Log
Your workshop has been successfully deployed to the test instance. ✨
Please test your workshop on the development instance and notify us via comment when you deem it ready for public consumption on the production instance.