clarify threshold

Author: ncborcherding

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: immApex
 Title: Tools for Adaptive Immune Receptor Sequence-Based Machine and Deep Learning
-Version: 1.4.2
+Version: 1.4.3
 Authors@R: c(
     person(given = "Nick", family = "Borcherding", role = c("aut", "cre"), email = "ncborch@gmail.com"))
 Description: A set of tools to for machine and deep learning in R from amino acid and nucleotide sequences focusing on adaptive immune receptors. The package includes pre-processing of sequences, unifying gene nomenclature usage, encoding sequences, and combining models. This package will serve as the basis of future immune receptor sequence functions/packages/models compatible with the scRepertoire ecosystem.

NEWS.md

@@ -1,4 +1,4 @@
-# immApex VERSION 1.4.2
+# immApex VERSION 1.4.3
 
 ## NEW FEATURES
 The `buildNetwork()` function has been significantly enhanced to include:

R/buildNetwork.R

@@ -13,7 +13,7 @@
 #' `cdr3`, `v_call`, `j_call`).
 #' @param threshold >= 1 for absolute distance **or** 0 < x <= 1 for relative.
 #' When using normalized distances (`normalize != "none"`), this typically 
-#' should be a value between 0 and 1 (e.g., 0.1 for 10 percent dissimilarity).
+#' should be a value between 0 and 1 (e.g., 0.9 for 10 percent dissimilarity).
 #' @param filter.v Logical; require identical V when `TRUE`.
 #' @param filter.j Logical; require identical J when `TRUE`.
 #' @param ids Optional character labels; recycled from row-names if missing.