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martensonmartenson
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add umsa tools split by sections
should correspond to what is currently installed save some polish like addition of expression tools and some cleanup of old pakcage_ stuff etc.
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‎galaxy-umsa.grid.cesnet.cz/camera.yml‎

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tool_panel_section_label: CAMERA
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tools:
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- name: camera_annotate
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owner: lecorguille
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- name: camera_combinexsannos
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owner: mmonsoor

‎galaxy-umsa.grid.cesnet.cz/camera.yml.lock‎

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tools:
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- name: camera_annotate
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owner: lecorguille
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revisions:
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- 4b9ab71be05e
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- 75a1b3f7bacc
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- abf1775ac14d
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tool_panel_section_id: camera
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tool_panel_section_label: CAMERA
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tool_shed_url: toolshed.g2.bx.psu.edu
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- name: camera_combinexsannos
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owner: mmonsoor
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revisions:
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- 961089e21ae2
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tool_panel_section_id: camera
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tool_panel_section_label: CAMERA
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tool_shed_url: toolshed.g2.bx.psu.edu

‎galaxy-umsa.grid.cesnet.cz/chemicaltoolbox.yml‎

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tool_panel_section_label: ChemicalToolBox
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tools:
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- name: rem_complex
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owner: recetox
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- name: openbabel_remions
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owner: bgruening
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- name: msconvert
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owner: galaxyp
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- name: smina
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owner: earlhaminst
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- name: apoc
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owner: earlhaminst
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- name: parmconv
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owner: chemteam
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- name: enumerate_charges
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owner: bgruening
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- name: sdf_to_tab
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owner: bgruening
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- name: fpocket
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owner: bgruening
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- name: chembl_structure_pipeline
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owner: bgruening
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- name: chembl
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owner: bgruening
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- name: ambertools_parmchk2
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owner: chemteam
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- name: ambertools_antechamber
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owner: chemteam
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- name: ambertools_acpype
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owner: chemteam
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- name: mordred
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owner: bgruening
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- name: get_pdb
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owner: bgruening
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- name: get_pubchem
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owner: bgruening
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- name: get_online_data
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owner: bgruening
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- name: autodock_vina
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owner: bgruening
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- name: autodock_vina_prepare_ligand
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owner: bgruening
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- name: autodock_vina_prepare_box
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owner: bgruening
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- name: openbabel_remduplicates
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owner: bgruening
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- name: openbabel_addh
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owner: bgruening
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- name: openbabel_filter
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owner: bgruening
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- name: openbabel_subsearch
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owner: bgruening
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- name: openbabel_compound_convert
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owner: bgruening
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- name: openbabel_remove_protonation_state
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owner: bgruening
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- name: openbabel_spectrophore_search
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owner: bgruening
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- name: openbabel_svg_depiction
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owner: bgruening
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- name: openbabel_multi_obgrep
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owner: bgruening
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- name: openbabel_genprop
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owner: bgruening
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- name: openbabel_change_title
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owner: bgruening
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- name: openbabel_obgrep
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owner: bgruening
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- name: openbabel_remsmall
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owner: bgruening
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- name: prepare_ligands_for_docking
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owner: bgruening
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- name: biomd_neqgamma
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owner: chemteam
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- name: biomd_rmsd_clustering
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owner: chemteam
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- name: biomd_extract_clusters
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owner: chemteam
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- name: fastpca
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owner: chemteam
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- name: bio3d_dccm
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owner: chemteam
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- name: bio3d_pca_visualize
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owner: chemteam
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- name: bio3d_pca
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owner: chemteam
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- name: bio3d_rmsd
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owner: chemteam
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- name: bio3d_rmsf
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owner: chemteam
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- name: mdanalysis_extract_rmsd
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owner: chemteam
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- name: mdanalysis_ramachandran_protein
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owner: chemteam
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- name: mdanalysis_endtoend
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owner: chemteam
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- name: mdanalysis_cosine_analysis
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owner: chemteam
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- name: vmd_hbonds
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owner: chemteam
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- name: mdanalysis_hbonds
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owner: chemteam
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- name: mdanalysis_ramachandran_plot
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owner: chemteam
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- name: mdanalysis_distance
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owner: chemteam
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- name: mdanalysis_dihedral
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owner: chemteam
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- name: mdanalysis_rdf
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owner: chemteam
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- name: mdanalysis_angle
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owner: chemteam
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- name: packmol
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owner: chemteam
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- name: ctb_rdkit_descriptors
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owner: bgruening
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- name: alchemical_analysis
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owner: chemteam
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- name: gmx_editconf
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owner: chemteam
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- name: gmx_makendx
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owner: chemteam
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- name: gmx_restraints
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owner: chemteam
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- name: gmx_energy
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owner: chemteam
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- name: gmx_trj
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owner: chemteam
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- name: gmx_fep
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owner: chemteam
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- name: gmx_sim
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owner: chemteam
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- name: gmx_merge_topology_files
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owner: chemteam
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- name: gmx_nvt
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owner: chemteam
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- name: gmx_md
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owner: chemteam
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- name: gmx_solvate
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owner: chemteam
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- name: gmx_em
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owner: chemteam
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- name: gmx_setup
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owner: chemteam
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- name: md_converter
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owner: chemteam
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- name: gmx_npt
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owner: chemteam
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- name: padel
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owner: bgruening
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- name: qed
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owner: bgruening
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- name: sucos_docking_scoring
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owner: bgruening
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- name: sucos_clustering
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owner: bgruening
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- name: sucos_max_score
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owner: bgruening
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- name: openbabel_structure_distance_finder
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owner: bgruening
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- name: ctb_frankenstein_ligand
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owner: bgruening
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- name: rdock_rbcavity
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owner: bgruening
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- name: rdock_rbdock
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owner: bgruening
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- name: rdock_sort_filter
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owner: bgruening
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- name: rxdock_rbcavity
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owner: bgruening
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- name: rxdock_rbdock
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owner: bgruening
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- name: rxdock_sort_filter
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owner: bgruening
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- name: xchem_transfs_scoring
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owner: bgruening
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- name: mmpbsa_mmgbsa
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owner: chemteam
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- name: ctb_im_pbf_ev
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owner: bgruening
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- name: ctb_im_rxn_smarts_filter
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owner: bgruening
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- name: ctb_im_conformers
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owner: bgruening
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- name: ctb_im_constrained_conf_gen
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owner: bgruening
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- name: ctb_im_cluster_butina_matrix
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owner: bgruening
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- name: ctb_im_o3dalign
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owner: bgruening
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- name: ctb_im_standardize
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owner: bgruening
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- name: ctb_im_cluster_butina
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owner: bgruening
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- name: ctb_im_max_min_picker
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owner: bgruening
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- name: ctb_im_rxn_maker
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owner: bgruening
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- name: ctb_im_screen
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owner: bgruening
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- name: ctb_im_xcos
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owner: bgruening
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- name: query
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owner: recetox
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tool_shed_url: testtoolshed.g2.bx.psu.edu

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