testing.yml

name: ci

on:
  push:
    branches: [ master ]
  pull_request:
    branches: [ master ]

jobs:
  lint:
    runs-on: ubuntu-latest
    steps:
    - uses: actions/setup-python@v2
      with:
        python-version: "3.12"
    - uses: actions/checkout@v2
    - name: Lint with flake8
      run: |
        pip install flake8
        flake8 .
    - name: Lint with black
      run: |
        pip install black
        black --check .
  build:
    runs-on: ubuntu-latest
    strategy:
      fail-fast: false
      matrix:
        python-version: ['3.10','3.11','3.12','3.13']
    steps:
    - uses: actions/checkout@v2
    - name: Set up Python ${{ matrix.python-version }}
      uses: actions/setup-python@v2
      with:
        python-version: ${{ matrix.python-version }}
    - name: Update
      run: |
        sudo apt update
    - name: Install CGAL 5
      run: |
        sudo apt install -y libcgal-dev
    - name: Install other dependencies
      run: |
        sudo apt install -y libopenmpi3 libopenmpi-dev openmpi-bin
        sudo apt install -y libhdf5-dev
    - name: Install Python build dependencies
      run: |
        python -m pip install --upgrade pip
        python -m pip install Cython numpy
    - name: Verify Cython inpoly kernel is available
      env:
        OCEANMESH_INPOLY_ACCEL: "1"
      run: |
        python -m pip install -e .
        python - << 'PY'
        import os, importlib
        from oceanmesh.geometry import point_in_polygon as pip

        # Ensure we use the default acceleration behaviour
        os.environ.pop("OCEANMESH_INPOLY_METHOD", None)
        os.environ["OCEANMESH_INPOLY_ACCEL"] = "1"
        pip = importlib.reload(pip)

        if not getattr(pip, "_COMPILED_KERNEL_AVAILABLE", False):
            raise SystemExit("Cython inpoly2 kernel not available in CI environment")

        print("_COMPILED_KERNEL_AVAILABLE =", pip._COMPILED_KERNEL_AVAILABLE)
        from oceanmesh.geometry.point_in_polygon_ import inpoly2_fast
        print("inpoly2_fast:", inpoly2_fast)
        PY
    - name: Test with tox
      env:
        OCEANMESH_INPOLY_ACCEL: "1"
        OCEANMESH_INPOLY_METHOD: ""
      run: |
        python -m pip install tox
        tox
    - uses: codecov/codecov-action@v1