Biojava dependency

[shamseen]

Cannot resolve GenbankReaderHelper - library issues with biojava? Current workaround is commenting out lines 132-145 in org.cidarlab.data.genbank.GenbankImporter

[eoberortner]

I’d recommend switching to libSBOLj for importing sequence files (e.g., FASTA or Genbank). http://sbolstandard.org/libsbolj-2-2-1-release/ <http://sbolstandard.org/libsbolj-2-2-1-release/>

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On May 17, 2017, at 12:12 PM, Shamseen ***@***.***> wrote: Cannot resolve GenbankReaderHelper - library issues with biojava? Current workaround is commenting out lines 132-145 in org.cidarlab.data.genbank.GenbankImporter — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#1>, or mute the thread <https://github.com/notifications/unsubscribe-auth/ABUOZpsiGkq49hd8dBfSQqKfecj-Oz5Mks5r60aPgaJpZM4NeUPa>.

[yvi1]

Hi @eoberortner. Shamseen and I are working on a project that uses Eugene. I asked her to create issues while she is installing and running Eugene. Don't be surprised to see more to come. We will be fixing some of them.

[eoberortner]

Sounds great! Just wanted to help out how to fix the issues efficiently, in my opinion. :)

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On May 17, 2017, at 1:06 PM, Yury Ivanov ***@***.***> wrote: Hi @eoberortner <https://github.com/eoberortner>. Shamseen and I are working on a project that uses Eugene. I asked her to create issues while she is installing and running Eugene. Don't be surprised to see more to come. We will be fixing some of them. — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#1 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/ABUOZj-_iNapyfIMSsF3O6jmVZB9NJLCks5r61NLgaJpZM4NeUPa>.