[pre-commit.ci] auto fixes from pre-commit.com hooks

pre-commit-ci[bot] · pre-commit-ci[bot] · commit ff1bb2bd4f05 · 2025-10-06T17:19:36.000Z
for more information, see https://pre-commit.ci
diff --git a/src/Assimilate.cpp b/src/Assimilate.cpp
@@ -89,7 +89,7 @@ void CModel::AssimilationOverride(const int p,const optStruct& Options,const tim
     Qmodlast= _pSubBasins[p]->GetLastOutflowRate();
     if(Qmod>PRETTY_SMALL) {
       _aDAscale  [p]=1.0+alpha*((Qobs-Qmod)/Qmod); //if alpha = 1, Q=Qobs in observation basin
-      //_aDAQadjust[p]=alpha*(Qobs-Qmod); //Option A: end of time step flow 
+      //_aDAQadjust[p]=alpha*(Qobs-Qmod); //Option A: end of time step flow
       //_aDAQadjust[p]=0.5*alpha*(2.0*Qobs-Qmodlast-Qmod);//Option B: mean flow - rapidly oscillatory Q - Qmean is perfect
       if (Qobs2 == RAV_BLANK_DATA) { //Option C: aim for midpoint of two observation flows (this is the way)
         _aDAQadjust[p]=alpha*(Qobs-Qmod);
@@ -155,7 +155,7 @@ void CModel::PrepareAssimilation(const optStruct &Options,const time_struct &tt)
 
     pdown=GetDownstreamBasin(p);
 
-    ObsExists=false; 
+    ObsExists=false;
 
     if(_pSubBasins[p]->UseInFlowAssimilation())
     {
@@ -202,9 +202,9 @@ void CModel::PrepareAssimilation(const optStruct &Options,const time_struct &tt)
     else if(!ObsExists)  //observations may be downstream, propagate scaling upstream
     {
       //if ((pdown!=DOESNT_EXIST) && (!_aDAoverride[pdown])){ //alternate - allow information to pass through reservoirs
-      if( (pdown!=DOESNT_EXIST) && 
-          (_pSubBasins[p]->GetReservoir()==NULL) && 
-          (!_aDAoverride[p]) && 
+      if( (pdown!=DOESNT_EXIST) &&
+          (_pSubBasins[p]->GetReservoir()==NULL) &&
+          (!_aDAoverride[p]) &&
           (_pSubBasins[p]->IsEnabled()) && (_pSubBasins[pdown]->IsEnabled())) {
         _aDAscale      [p]= _aDAscale    [pdown];
         _aDAlength     [p]+=_pSubBasins  [pdown]->GetReachLength();
@@ -291,10 +291,10 @@ void CModel::AssimilationBackPropagate(const optStruct &Options,const time_struc
     pdown=GetDownstreamBasin(p);
 
     if(!_aDAoverride[p]) { //observations may be downstream, get scaling from downstream
-      if( (pdown!=DOESNT_EXIST                 ) && 
-          (!_aDAoverride[p]                    ) && 
-          (_pSubBasins[p]->GetReservoir()==NULL) && 
-          (_pSubBasins[p]->IsEnabled()) && (_pSubBasins[pdown]->IsEnabled())) 
+      if( (pdown!=DOESNT_EXIST                 ) &&
+          (!_aDAoverride[p]                    ) &&
+          (_pSubBasins[p]->GetReservoir()==NULL) &&
+          (_pSubBasins[p]->IsEnabled()) && (_pSubBasins[pdown]->IsEnabled()))
       {
         _aDAQadjust[p]= _aDAQadjust  [pdown] * (_pSubBasins[p]->GetDrainageArea() / _pSubBasins[pdown]->GetDrainageArea());
       }
@@ -310,7 +310,7 @@ void CModel::AssimilationBackPropagate(const optStruct &Options,const time_struc
   double ECCCwt;
   for(p=0; p<_nSubBasins; p++)
   {
-    if(!_aDAoverride[p]) 
+    if(!_aDAoverride[p])
     {
       pdown=GetDownstreamBasin(p);
       if (pdown!=DOESNT_EXIST){
diff --git a/src/DemandOptimization.h b/src/DemandOptimization.h
@@ -261,7 +261,7 @@ class CDemandOptimizer
   double        **_aDhist;             //< history of actual delivery [size: _nEnabledSBs * _nHistoryItems]
   double        **_aIhist;             //< history of reservoir inflows [size: _nEnabledSBs * _nHistoryItems]
   double        **_ahhist;             //< history of actual reservoir stages  (or 0 for non-reservoir basins) [size: _nEnabledSBs * _nHistoryItems]
-  double        **_aAhist;             //< history of actual reservoir areas [size: _nEnabledSBs * _nHistoryItems] 
+  double        **_aAhist;             //< history of actual reservoir areas [size: _nEnabledSBs * _nHistoryItems]
 
   int             _nSolverResiduals;   //< number of residuals of solution (equal to lp_lib::nRows)
   double         *_aSolverResiduals;   //< vector of residuals of solution [size: _nSolverResiduals]
diff --git a/src/EnKF.cpp b/src/EnKF.cpp
@@ -188,10 +188,10 @@ EnKF_mode CEnKFEnsemble::GetEnKFMode() const
 
 //////////////////////////////////////////////////////////////////
 /// \brief initializes EnKF assimilation run
-/// - performs QA/QC on inputs 
+/// - performs QA/QC on inputs
 /// - gets #s and names of state variables adjusted during assimilation
 /// - allocate & populate _output_matrix, _obs_matrix, _noise_matrix
-/// - open blank EnKFOutput.csv file 
+/// - open blank EnKFOutput.csv file
 /// \param &Options [out] Global model options information
 //
 void CEnKFEnsemble::Initialize(const CModel* pModel,const optStruct &Options)
diff --git a/src/Flush.cpp b/src/Flush.cpp
@@ -77,7 +77,7 @@ void   CmvFlush::GetRatesOfChange( const double      *storage,
                                    const optStruct   &Options,
                                    const time_struct &tt,
                                          double     *rates) const
-{ 
+{
   double mult=_percentage;
   if (_percentage==BY_SUBBASIN_FLAG){
     int p=pHRU->GetSubBasinIndex();
diff --git a/src/ForcingGrid.cpp b/src/ForcingGrid.cpp
@@ -431,7 +431,7 @@ void CForcingGrid::ForcingGridInit(const optStruct   &Options)
   double time_zone=0;
   GetTimeInfoFromNetCDF(unit_t,calendar,my_time,ntime,_filename,_interval,_start_day,_start_year,time_zone);
   _steps_per_day=(int)(rvn_round(1.0/_interval)); //pre-calculate for speed.
-  
+
   /*
   printf("ForcingGrid: unit_t:          %s\n",unit_t_str.c_str());
   printf("ForcingGrid: tt.julian_day:   %f\n",tt.julian_day);
diff --git a/src/LatFlush.cpp b/src/LatFlush.cpp
@@ -106,19 +106,19 @@ void CmvLatFlush::Initialize()
     for(int p=0;p<_pModel->GetNumSubBasins();p++)
     {
       if (_pModel->GetSubBasin(p)->IsEnabled()) {
-      
+
         for(int ks=0; ks<_pModel->GetSubBasin(p)->GetNumHRUs(); ks++) //sources
         {
           k1=_pModel->GetSubBasin(p)->GetHRU(ks)->GetGlobalIndex();
           Asum=0.0;
           nRecipients=0;
           if (fromHRUGrp->IsInGroup(k1)) {
-          
+
             for(int ks2=0; ks2<_pModel->GetSubBasin(p)->GetNumHRUs(); ks2++) //recipients
             {
               k2=_pModel->GetSubBasin(p)->GetHRU(ks2)->GetGlobalIndex();
 
-              if (toHRUGrp->IsInGroup(k2)) 
+              if (toHRUGrp->IsInGroup(k2))
               {
                 if (k1!=k2){
                   kFrom[q]=k1;
@@ -127,7 +127,7 @@ void CmvLatFlush::Initialize()
                   _aFrac[q]=area;
                   Asum+=area;//sum of recipient areas
                   nRecipients++;
-                
+
                   //cout << "ADDING CONNECTION " << q << " in subbasin "<< _pModel->GetSubBasin(p)->GetName() << ": "
                   //     << _pModel->GetHydroUnit(kFrom[q])->GetHRUID()  << " To " <<_pModel->GetHydroUnit(kTo[q])->GetHRUID() <<" "<<_aFrac[q]<<endl;
                   q++;
diff --git a/src/Model.cpp b/src/Model.cpp
@@ -33,7 +33,7 @@ CModel::CModel(const int        nsoillayers,
   _nTransParams=0;    _pTransParams=NULL;
   _nClassChanges=0;   _pClassChanges=NULL;
   _nParamOverrides=0; _pParamOverrides=NULL;
-  _nStateVarOverrides=0;_pStateVarOverrides=NULL; 
+  _nStateVarOverrides=0;_pStateVarOverrides=NULL;
   _nObservedTS=0;     _pObservedTS=NULL; _pModeledTS=NULL; _aObsIndex=NULL;
   _nObsWeightTS =0;   _pObsWeightTS=NULL;
   _nDiagnostics=0;    _pDiagnostics=NULL;
@@ -2767,7 +2767,7 @@ void CModel::RecalculateHRUDerivedParams(const optStruct    &Options,
 void CModel::PrepareForcingPerturbation(const optStruct &Options, const time_struct &tt)
 {
   if (_nPerturbations==0){return;}
-  
+
   double partday      = Options.julian_start_day-floor(Options.julian_start_day+TIME_CORRECTION);
   int    nn           = (int)(rvn_round((tt.model_time+partday-floor(tt.model_time+partday+TIME_CORRECTION))/Options.timestep));
   bool   start_of_day = ((nn==0) || tt.day_changed); //nn==0 corresponds to midnight
diff --git a/src/Model.h b/src/Model.h
@@ -88,7 +88,7 @@ class CModel: public CModelABC
   sv_type       *_aStateVarType;  ///< type of state variable in unit i  [size:_nStateVars]
   int          *_aStateVarLayer;  ///< index of state variable for multilayer variables (e.g., SOIL); [size:_nStateVars] value=DOESNT_EXIST(-1) for unique variables (e.g. SURFACE_WATER)
   int         _aStateVarIndices[MAX_STATE_VAR_TYPES][MAX_SV_LAYERS]; ///< lookup table for state variable indices; the index of SOIL[1] in a state_var[] array may be returned by aStateVarIndices[(int)(SOIL)][1]
-  
+
   sv_over **_pStateVarOverrides;  ///< array of pointers to state variable override time series
   int       _nStateVarOverrides;  ///< number of state variable overrides
 
diff --git a/src/ModelForcingGrids.cpp b/src/ModelForcingGrids.cpp
@@ -39,7 +39,7 @@ CForcingGrid *CModel::ForcingCopyCreate(const CForcingGrid *pGrid,
       GridDims[0] = pGrid->GetCols();
       GridDims[1] = pGrid->GetRows();
       GridDims[2] = nVals;
-    } 
+    }
     else {
       GridDims[0] = pGrid->GetCols();
       GridDims[1] = nVals;
@@ -128,7 +128,7 @@ void CModel::GenerateGriddedPrecipVars(const optStruct &Options)
 /// \brief Creates all missing gridded temperature data based on gridded information available,
 ///        e.g when only sub-daily temperature is provided estimate daily average, minimum and maximum temperature.
 ///        data are assumed to have the same resolution and hence can be initialized together.
-///        called with each new chunk of data 
+///        called with each new chunk of data
 ///
 /// \param Options [in]  major options of the model
 //
@@ -226,7 +226,7 @@ void CModel::GenerateAveSubdailyTempFromMinMax(const optStruct &Options)
     pTave_daily = ForcingCopyCreate(pTmin,F_TEMP_DAILY_AVE,1.0,nVals,Options);
 
     double time_shift=Options.julian_start_day-floor(Options.julian_start_day+TIME_CORRECTION);
-    double t=0.0; 
+    double t=0.0;
     int chunk_size =pTave_daily->GetChunkSize();
     int nNonZero   =pTave_daily->GetNumberNonZeroGridCells();
     for(int it=0; it<chunk_size; it++) {            // loop over time points in buffer
diff --git a/src/ParseFEWSRunInfo.cpp b/src/ParseFEWSRunInfo.cpp
@@ -15,7 +15,7 @@ void GetNetCDFStationArray(const int ncid, const string filename,int &stat_dimid
 ///
 /// \param *&pModel [in/out] Reference to model object
 /// \param &Options [in/out] Global model options information
-/// \param runname_overridden [in] true if runname specified from command line 
+/// \param runname_overridden [in] true if runname specified from command line
 /// \param mode_overridden [in] true if mode specified from command line
 /// \param optionsonly [in] true if model is not yet created and only options content should be read
 /// \return True if operation is successful
@@ -149,8 +149,8 @@ bool ParseNetCDFRunInfoFile(CModel *&pModel, optStruct &Options, bool runname_ov
   // Ingest properties      =====================================================================
   int varid_props;
   retval = nc_inq_varid(ncid,"properties",&varid_props);
-  
-  if (retval != NC_ENOTVAR) 
+
+  if (retval != NC_ENOTVAR)
   {
     HandleNetCDFErrors(retval);
 
@@ -174,9 +174,9 @@ bool ParseNetCDFRunInfoFile(CModel *&pModel, optStruct &Options, bool runname_ov
       }
     }
     // SuppressWarnings
-    if (optionsonly) { 
+    if (optionsonly) {
       retval = nc_inq_attlen(ncid,varid_props,"BlockRavenWarnings",&att_len);
-      if (retval != NC_ENOTATT) 
+      if (retval != NC_ENOTATT)
       {
         HandleNetCDFErrors(retval);
         char* boolean=new char[att_len+1];
@@ -192,7 +192,7 @@ bool ParseNetCDFRunInfoFile(CModel *&pModel, optStruct &Options, bool runname_ov
     //Block custom output
     if (!optionsonly) {
       retval = nc_inq_attlen(ncid,varid_props,"BlockRavenCustomOutput",&att_len);
-      if (retval != NC_ENOTATT) 
+      if (retval != NC_ENOTATT)
       {
         HandleNetCDFErrors(retval);
         char* boolean=new char[att_len+1];
@@ -210,7 +210,7 @@ bool ParseNetCDFRunInfoFile(CModel *&pModel, optStruct &Options, bool runname_ov
     //NoisyMode
     if (optionsonly) {
       retval = nc_inq_attlen(ncid, varid_props, "NoisyMode", &att_len);
-      if (retval != NC_ENOTATT) 
+      if (retval != NC_ENOTATT)
       {
         HandleNetCDFErrors(retval);
         char* boolean = new char[att_len + 1];
@@ -227,7 +227,7 @@ bool ParseNetCDFRunInfoFile(CModel *&pModel, optStruct &Options, bool runname_ov
     //SilentMode
     if (optionsonly) {
       retval = nc_inq_attlen(ncid, varid_props, "SilentMode", &att_len);
-      if (retval != NC_ENOTATT) 
+      if (retval != NC_ENOTATT)
       {
         HandleNetCDFErrors(retval);
         char* boolean = new char[att_len + 1];
@@ -261,7 +261,7 @@ bool ParseNetCDFRunInfoFile(CModel *&pModel, optStruct &Options, bool runname_ov
     // EnKFMode
     if (!optionsonly) {
       retval = nc_inq_attlen(ncid, varid_props, "EnKFMode", &att_len);
-      if(retval != NC_ENOTATT) 
+      if(retval != NC_ENOTATT)
       {
         HandleNetCDFErrors(retval);
         char* modestr = new char[att_len];
@@ -290,7 +290,7 @@ bool ParseNetCDFRunInfoFile(CModel *&pModel, optStruct &Options, bool runname_ov
     // AssimilateStreamflow
     if (optionsonly) {
       retval = nc_inq_attlen(ncid,varid_props,"AssimilateStreamflow",&att_len);
-      if (retval != NC_ENOTATT) 
+      if (retval != NC_ENOTATT)
       {
         HandleNetCDFErrors(retval);
         char* boolean = new char[att_len + 1];
diff --git a/src/ParseInitialConditionFile.cpp b/src/ParseInitialConditionFile.cpp
@@ -231,7 +231,7 @@ bool ParseInitialConditionsFile(CModel *&pModel, const optStruct &Options)
 
         if (typ==UNRECOGNIZED_SVTYPE){
           WriteWarning(":UniformInitialConditions: unrecognized state variable type "+to_string(s[1]),Options.noisy);break;
-        } 
+        }
         else {
           SVind=pModel->GetStateVarIndex(typ,layer_ind);
 
diff --git a/src/ParseInput.cpp b/src/ParseInput.cpp
@@ -115,7 +115,7 @@ bool ParseInputFiles (CModel      *&pModel,
     ExitGracefullyIf(Options.julian_start_year==1666,
                   "ParseMainInputFile:: no :StartDate supplied in .rvi or runinfo.nc file.",BAD_DATA_WARN);
   }
-  
+
   // Class Property file (.rvp)
   //--------------------------------------------------------------------------------
   if (!ParseClassPropertiesFile  (pModel,Options,terr_reqd)){
diff --git a/src/ParsePropertyFile.cpp b/src/ParsePropertyFile.cpp
@@ -461,9 +461,9 @@ bool ParseClassPropertiesFile(CModel         *&pModel,
           ExitGracefullyIf(Len!=(nhoriz*2+2),
                            "ParseClassPropertiesFile:  :SoilProfiles invalid command length",BAD_DATA);
           bool is_special= (!string(s[0]).substr(0,4).compare("LAKE"    )) ||
-                           (!string(s[0]).substr(0,5).compare("WATER"   )) || 
+                           (!string(s[0]).substr(0,5).compare("WATER"   )) ||
                            (!string(s[0]).substr(0,7).compare("GLACIER" )) ||
-                           (!string(s[0]).substr(0,4).compare("ROCK"    )) || 
+                           (!string(s[0]).substr(0,4).compare("ROCK"    )) ||
                            (!string(s[0]).substr(0,8).compare("PAVEMENT")) ||
                            (!string(s[0]).substr(0,7).compare("WETLAND" ));
 
diff --git a/src/ParseTimeSeriesFile.cpp b/src/ParseTimeSeriesFile.cpp
@@ -1315,7 +1315,7 @@ bool ParseTimeSeriesFile(CModel *&pModel, const optStruct &Options)
       int i=pModel->GetStateVarIndex(typ,layer_ind);
       sv_over *pSO=new sv_over(pTimeSer,kk,i);
       pModel->AddStateVarOverride(pSO);
-      
+
       break;
     }
     case (300)://----------------------------------------------
diff --git a/src/RavenInclude.h b/src/RavenInclude.h
@@ -866,7 +866,7 @@ enum assimtype
 //
 enum sv_type
 {
-  // Water Storage Compartments 
+  // Water Storage Compartments
   SURFACE_WATER,           ///< [mm] Streams & rivers: see surface_struct (REQUIRED)
   ATMOSPHERE,              ///< [mm] atmosphere : recieves water only!! (REQUIRED)
   ATMOS_PRECIP,            ///< [mm] atmosphere : provides water only!! (REQUIRED)
@@ -1194,7 +1194,7 @@ struct optStruct
   int              nNetCDFattribs;            ///< size of array of NetCDF attributes
   int              NetCDF_chunk_mem;          ///< [MB] size of memory chunk for each forcing grid
   bool             in_bmi_mode;               ///< true if in BMI mode (no rvt files, no end time)
-  double           sv_override_endtime;       ///< model time [d] after which state variable overrides are disabled (default: 1e99) 
+  double           sv_override_endtime;       ///< model time [d] after which state variable overrides are disabled (default: 1e99)
 };
 
 ///////////////////////////////////////////////////////////////////
diff --git a/src/SubBasin.cpp b/src/SubBasin.cpp
@@ -1222,7 +1222,7 @@ bool CSubBasin::SetBasinProperties(const string label,
 };
 double CSubBasin::GetBasinProperties(const basin_props prop)
 {
-  switch (prop) 
+  switch (prop)
   {
     case BP_TIME_CONC:        return _t_conc;
     case BP_TIME_TO_PEAK:     return _t_peak;
@@ -1544,7 +1544,7 @@ double CSubBasin::ScaleAllFlows(const double &scale, const bool overriding, cons
 /// \remark Messes with mass balance something fierce!
 /// \param &Qadjust [in] Qadjust
 /// \param overriding [in] false if in backpropagation mode
-/// \param assimsitte [in] true if this is an assimilation site with data 
+/// \param assimsitte [in] true if this is an assimilation site with data
 /// \param &tstep [in] time step [d]
 /// \return volume added to system [m3]
 ///
@@ -1573,7 +1573,7 @@ double CSubBasin::AdjustAllFlows(const double &adjust, const bool overriding,con
     }
   }
   else if ((!overriding)  && (assimsite)){ //Just QinHist
-    for(int n=1;n<_nQinHist; n++) { 
+    for(int n=1;n<_nQinHist; n++) {
       _aQinHist[n]+=adjust*(_drainage_area-_basin_area)/_drainage_area*corr;
       upperswap(_aQinHist[n],0.0);
       va+=adjust*tstep*SEC_PER_DAY;
diff --git a/src/TimeSeries.cpp b/src/TimeSeries.cpp
@@ -413,7 +413,7 @@ double CTimeSeries::GetAvgValue(const double &t, const double &tstep) const
     }
   }
   else{
-    if (n1 == n2){ 
+    if (n1 == n2){
       if (n1==_nPulses-1){return _aVal[n1];}
       return _aVal[n1]+(t_loc+0.5*tstep-(double)(n1)*_interval)/(_interval)*(_aVal[n1+1]-_aVal[n1]);
     }
@@ -826,7 +826,7 @@ CTimeSeries *CTimeSeries::Parse(CParser *p, bool is_pulse, string name, long lon
                                            LinTrans_a,           // linear transformation: a in new = a*data+b
                                            LinTrans_b            // linear transformation: b in new = a*data+b
                                            );
-    
+
 
     p->Tokenize(s,Len);//read closing term (e.g., ":EndData")
     if(string(s[0]).substr(0,4)!=":End"){
@@ -1070,7 +1070,7 @@ CTimeSeries *CTimeSeries::Parse(CParser *p, bool is_pulse, string name, long lon
     ExitGracefully("CTimeSeries: Parse: exceeded specified number of time series points in sequence or no :EndData command used. ",BAD_DATA);
   }
 
-  
+
   pTimeSeries=new CTimeSeries(name,loc_ID,p->GetFilename(),start_day,start_yr,tstep,aVal,n,is_pulse);
   delete [] aVal;  aVal =NULL;
   return pTimeSeries;
diff --git a/src/TimeSeries.h b/src/TimeSeries.h
@@ -128,7 +128,7 @@ class CTimeSeries: public CTimeSeriesABC
                                                string name,                 // forcing type
                                                long long  loc_ID,           // critical information about timeseries, e.g. subbasin ID or HRU ID
                                                string gauge_name,           // gauge name if gauge-linked data ("none" otherwise)
-                                               bool   is_pulse,             // step format of data 
+                                               bool   is_pulse,             // step format of data
                                                bool   shift_to_per_ending,  // true if data are period starting and need to be shifted (HYDROGRAPH?)
                                                bool   shift_from_per_ending,// true if data are period-ending and need to be shifted
                                                string FileNameNC,           // file name of NetCDF
diff --git a/src/UnitTesting.cpp b/src/UnitTesting.cpp
@@ -624,4 +624,4 @@ void TestRandomSampling() {
     TEST<<GaussRandom()<<endl;
   }
   ExitGracefully("UnitTesting:: TestRandomSampling",SIMULATION_DONE);
-}
+}
