-
Notifications
You must be signed in to change notification settings - Fork 5
Expand file tree
/
Copy pathrvs.py
More file actions
453 lines (363 loc) · 17.8 KB
/
rvs.py
File metadata and controls
453 lines (363 loc) · 17.8 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
import datetime as dt
import zipfile
from collections.abc import Sequence
from dataclasses import asdict, fields, is_dataclass
from pathlib import Path
from textwrap import dedent
from typing import Any, Optional, Union
import cftime
from pydantic import ConfigDict, Field, ValidationInfo, field_validator
from ..config import commands as rc
from ..config import options as o
from ..config import processes as rp
from .base import RV, Sym, optfield, parse_symbolic
try:
from raven_hydro import __raven_version__
except ImportError:
__raven_version__ = "0.0.0"
"""
Generic Raven model configuration.
Note that aliases are set to identify class attributes as Raven commands.
"""
date = Union[dt.date, dt.datetime, cftime.datetime]
class RVI(RV):
__rv__ = "RVI"
# Run parameters
silent_mode: Optional[bool] = optfield(alias="SilentMode")
noisy_mode: Optional[bool] = optfield(alias="NoisyMode")
run_name: Optional[str] = optfield(alias="RunName")
calendar: Optional[o.Calendar] = optfield(alias="Calendar")
start_date: Optional[Union[str, date]] = optfield(alias="StartDate")
assimilation_start_time: Optional[date] = optfield(alias="AssimilationStartTime")
end_date: Optional[Union[str, date]] = optfield(alias="EndDate")
duration: Optional[float] = optfield(alias="Duration")
time_step: Optional[Union[float, str]] = optfield(alias="TimeStep")
interpolation: Optional[o.Interpolation] = optfield(alias="Interpolation")
# Model description
routing: Optional[o.Routing] = optfield(alias="Routing")
catchment_route: Optional[o.CatchmentRoute] = optfield(alias="CatchmentRoute")
evaporation: Optional[o.Evaporation] = optfield(alias="Evaporation")
ow_evaporation: Optional[o.Evaporation] = optfield(alias="OW_Evaporation")
sw_radiation_method: Optional[o.SWRadiationMethod] = optfield(alias="SWRadiationMethod")
sw_cloud_correct: Optional[o.SWCloudCorrect] = optfield(alias="SWCloudCorrect")
sw_canopy_correct: Optional[o.SWCanopyCorrect] = optfield(alias="SWCanopyCorrect")
lw_radiation_method: Optional[o.LWRadiationMethod] = optfield(alias="LWRadiationMethod")
windspeed_method: Optional[o.WindspeedMethod] = optfield(alias="WindspeedMethod")
rain_snow_fraction: Optional[o.RainSnowFraction] = optfield(alias="RainSnowFraction")
potential_melt_method: Optional[o.PotentialMeltMethod] = optfield(alias="PotentialMeltMethod")
oro_temp_correct: Optional[o.OroTempCorrect] = optfield(alias="OroTempCorrect")
oro_precip_correct: Optional[o.OroPrecipCorrect] = optfield(alias="OroPrecipCorrect")
oro_pet_correct: Optional[o.OroPETCorrect] = optfield(alias="OroPETCorrect")
cloud_cover_method: Optional[o.CloudCoverMethod] = optfield(alias="CloudCoverMethod")
precip_icept_frac: Optional[o.PrecipIceptFract] = optfield(alias="PrecipIceptFract")
subdaily_method: Optional[o.SubdailyMethod] = optfield(alias="SubdailyMethod")
monthly_interpolation_method: Optional[o.MonthlyInterpolationMethod] = optfield(alias="MonthlyInterpolationMethod")
soil_model: Optional[rc.SoilModel] = optfield(alias="SoilModel")
temperature_correction: Optional[bool] = optfield(
alias="TemperatureCorrection",
description="Gridded or gauged temperature bias correction.",
)
lake_storage: Optional[o.StateVariables] = optfield(alias="LakeStorage")
relative_humidity_method: Optional[o.RelativeHumidityMethod] = optfield(alias="RelativeHumidityMethod")
define_hru_groups: Optional[Sequence[str]] = optfield(alias="DefineHRUGroups")
hydrologic_processes: Optional[Sequence[Union[rc.Process, rp.Conditional, rp.ProcessGroup]]] = optfield(alias="HydrologicProcesses")
evaluation_metrics: Optional[Sequence[o.EvaluationMetrics]] = optfield(alias="EvaluationMetrics")
evaluation_period: Optional[Sequence[rc.EvaluationPeriod]] = optfield(alias="EvaluationPeriod")
ensemble_mode: Optional[rc.EnsembleMode] = optfield(alias="EnsembleMode")
# Options
write_netcdf_format: Optional[bool] = optfield(alias="WriteNetcdfFormat")
netcdf_attribute: Optional[dict[str, str]] = optfield(alias="NetCDFAttribute")
custom_output: Optional[Sequence[rc.CustomOutput]] = optfield(alias="CustomOutput")
direct_evaporation: Optional[bool] = optfield(
alias="DirectEvaporation",
description="Rainfall is automatically reduced through evapotranspiration up to the limit of the calculated PET.",
)
deltares_fews_mode: Optional[bool] = optfield(alias="DeltaresFEWSMode")
debug_mode: Optional[bool] = optfield(alias="DebugMode")
dont_write_watershed_storage: Optional[bool] = optfield(
alias="DontWriteWatershedStorage",
description="Do not write watershed storage variables to disk.",
)
pavics_mode: Optional[bool] = optfield(alias="PavicsMode")
suppress_output: Optional[bool] = optfield(alias="SuppressOutput", description="Write minimal output to disk when enabled.")
write_forcing_functions: Optional[bool] = optfield(
alias="WriteForcingFunctions",
description="Write watershed averaged forcing functions (e.g. rainfall, radiation, PET, etc).",
)
write_subbasin_file: Optional[bool] = optfield(alias="WriteSubbasinFile") # Undocumented
write_local_flows: Optional[bool] = optfield(
alias="WriteLocalFlows",
description="Write local contribution to hydrograph in hydrograph.csv",
)
@field_validator("soil_model", mode="before")
@classmethod
def init_soil_model(cls, v):
if isinstance(v, int):
return rc.SoilModel(v)
return v
@field_validator("start_date", "end_date", "assimilation_start_time")
@classmethod
def dates2cf(cls, v, info):
"""Convert dates to cftime dates."""
if v is not None:
calendar = (info.data.get("calendar") or o.Calendar.PROLEPTIC_GREGORIAN).value.lower()
obj = cftime._cftime.DATE_TYPES[calendar]
if isinstance(v, str):
v = dt.datetime.fromisoformat(v)
return obj(*v.timetuple()[:6])
model_config = ConfigDict(arbitrary_types_allowed=True)
class RVT(RV):
__rv__ = "RVT"
gauge: Optional[Sequence[rc.Gauge]] = optfield(alias="Gauge")
station_forcing: Optional[Sequence[rc.StationForcing]] = optfield(alias="StationForcing")
gridded_forcing: Optional[Sequence[rc.GriddedForcing]] = optfield(alias="GriddedForcing")
observation_data: Optional[Sequence[rc.ObservationData]] = optfield(alias="ObservationData")
class RVP(RV):
__rv__ = "RVP"
params: Any = None
soil_classes: Optional[rc.SoilClasses] = optfield(alias="SoilClasses")
soil_profiles: Optional[rc.SoilProfiles] = optfield(alias="SoilProfiles")
vegetation_classes: Optional[rc.VegetationClasses] = optfield(alias="VegetationClasses")
land_use_classes: Optional[rc.LandUseClasses] = optfield(alias="LandUseClasses")
terrain_classes: Optional[rc.TerrainClasses] = optfield(alias="TerrainClasses")
soil_parameter_list: Optional[rc.SoilParameterList] = optfield(alias="SoilParameterList")
land_use_parameter_list: Optional[rc.LandUseParameterList] = optfield(alias="LandUseParameterList")
vegetation_parameter_list: Optional[rc.VegetationParameterList] = optfield(alias="VegetationParameterList")
channel_profile: Optional[Sequence[rc.ChannelProfile]] = optfield(alias="ChannelProfile")
# TODO: create list of all available parameters to constrain key
global_parameter: Optional[dict[str, Sym]] = Field({}, alias="GlobalParameter")
rain_snow_transition: Optional[rc.RainSnowTransition] = optfield(alias="RainSnowTransition")
seasonal_relative_lai: Optional[rc.SeasonalRelativeLAI] = optfield(alias="SeasonalRelativeLAI")
seasonal_relative_height: Optional[rc.SeasonalRelativeHeight] = optfield(alias="SeasonalRelativeHeight")
class RVC(RV):
__rv__ = "RVC"
hru_state_variable_table: Optional[rc.HRUStateVariableTable] = optfield(alias="HRUStateVariableTable")
basin_state_variables: Optional[rc.BasinStateVariables] = optfield(alias="BasinStateVariables")
uniform_initial_conditions: Optional[dict[str, Sym]] = optfield(alias="UniformInitialConditions")
class RVH(RV):
__rv__ = "RVH"
sub_basins: Optional[rc.SubBasins] = optfield(alias="SubBasins")
sub_basin_group: Optional[Sequence[rc.SubBasinGroup]] = optfield(alias="SubBasinGroup")
sub_basin_properties: Optional[rc.SubBasinProperties] = optfield(alias="SubBasinProperties")
sb_group_property_multiplier: Optional[Sequence[rc.SBGroupPropertyMultiplier]] = optfield(alias="SBGroupPropertyMultiplier")
gauged_sub_basin_group: Optional[str] = optfield(alias="GaugedSubBasinGroup")
hrus: Optional[rc.HRUs] = optfield(alias="HRUs")
hru_group: Optional[Sequence[rc.HRUGroup]] = optfield(alias="HRUGroup")
reservoirs: Optional[Sequence[rc.Reservoir]] = optfield(alias="Reservoirs")
class RVE(RV):
__rv__ = "RVE"
enkf_mode: Optional[o.EnKFMode] = optfield(alias="EnKFMode")
window_size: Optional[int] = optfield(alias="WindowSize")
solution_run_name: Optional[str] = optfield(alias="SolutionRunName")
extra_rvt_filename: Optional[str] = optfield(alias="ExtraRVTFilename")
output_directory_format: Optional[Union[str, Path]] = optfield(alias="OutputDirectoryFormat")
forecast_rvt_filename: Optional[str] = optfield(alias="ForecastRVTFilename")
truncate_hindcasts: Optional[bool] = optfield(alias="TruncateHindcasts")
forcing_perturbation: Optional[Sequence[rc.ForcingPerturbation]] = optfield(alias="ForcingPerturbation")
assimilated_state: Optional[Sequence[rc.AssimilatedState]] = optfield(alias="AssimilatedState")
assimilate_streamflow: Optional[Sequence[rc.AssimilateStreamflow]] = optfield(alias="AssimilateStreamflow")
observation_error_model: Optional[Sequence[rc.ObservationErrorModel]] = optfield(alias="ObservationErrorModel")
class Config(RVI, RVC, RVH, RVT, RVP, RVE):
__rv__ = None
@staticmethod
def header(rv):
"""Return the header to print at the top of each RV file."""
import ravenpy
return dedent(
f"""
###########################################################################################################
:FileType {rv.upper()} Raven {__raven_version__}
:WrittenBy RavenPy {ravenpy.__version__} based on setups provided by James Craig and Juliane Mai
:CreationDate {dt.datetime.now().isoformat(timespec="seconds")}
#----------------------------------------------------------------------------------------------------------
\n\n
"""
)
@field_validator("params", mode="before")
@classmethod
def _cast_to_dataclass(cls, data: Union[dict, Sequence]):
"""Cast params to a dataclass."""
# Needed because pydantic v2 does not cast tuples automatically.
if data is not None:
if is_dataclass(data):
return data
if isinstance(data, dict):
return cls.model_fields["params"].annotation(**data)
return cls.model_fields["params"].annotation(*data)
@field_validator("global_parameter", mode="before")
@classmethod
def _update_defaults(cls, v, info: ValidationInfo):
"""Some configuration parameters should be updated with user given arguments, not overwritten."""
return {**cls.model_fields[info.field_name].default, **v}
def set_params(self, params: Union[dict, Sequence]) -> "Config":
"""Return a new instance of Config with params frozen to their numerical values."""
# Create params with numerical values
if not self.is_symbolic:
raise ValueError(
"Setting `params` on a configuration without symbolic expressions has no effect. "
"Leave `params` to its default value when instantiating the emulator configuration."
)
p = self.__class__._cast_to_dataclass(params)
# Parse symbolic expressions using numerical params values
out = parse_symbolic(self.__dict__, **asdict(p))
out["params"] = p
# Instantiate config class
return self.__class__.model_construct(**out)
def set_solution(self, fn: Path, timestamp: bool = True) -> "Config":
"""
Return a new instance of Config with hru, basin states and start date set from an existing solution.
Parameters
----------
fn : Path
Path to solution file.
timestamp : bool
If False, ignore time stamp information in the solution. If True, the solution
will set StartDate to the solution's timestamp.
Returns
-------
Config
Config with internal state set from the solution file.
"""
from .defaults import CALENDAR
from .parsers import parse_solution
try:
calendar = self.calendar.value
except AttributeError:
calendar = CALENDAR
out = self.__dict__.copy()
sol = parse_solution(fn, calendar=calendar)
if timestamp is False:
sol.pop("start_date")
out.update(**sol, uniform_initial_conditions={})
return self.__class__(**out)
def duplicate(self, **kwds):
"""Duplicate this model, changing the values given in the keywords."""
out = self.model_copy(deep=True)
for key, val in self.model_validate(kwds).model_dump(exclude_unset=True).items():
setattr(out, key, val)
return out
def _rv(self, rv: str):
"""Return RV configuration."""
import inspect
# if self.is_symbolic:
# raise ValueError(
# "Cannot write RV files if `params` has symbolic variables. Use `set_params` method to set numerical "
# "values for `params`."
# )
# Get RV class
for cls in inspect.getmro(self.__class__):
if cls.__rv__ == rv.upper():
break
# Instantiate RV class
attrs = dict(self)
rv_attrs = {f: attrs[f] for f in cls.model_fields}
# Get model parameters and convert symbolic expressions.
if self.params is not None:
p = asdict(self.params)
rv_attrs = parse_symbolic(rv_attrs, **p)
rv = cls.model_validate(rv_attrs)
return rv.to_rv()
@property
def is_symbolic(self):
"""Return True if configuration contains symbolic expressions."""
if self.params is not None:
p = {field.name: getattr(self.params, field.name) for field in fields(self.params)}
return is_symbolic(p)
return False
@property
def rvi(self):
return self._rv("rvi")
@property
def rvt(self):
return self._rv("rvt")
@property
def rvp(self):
return self._rv("rvp")
@property
def rvc(self):
return self._rv("rvc")
@property
def rvh(self):
return self._rv("rvh")
@property
def rve(self):
return self._rv("rve")
def write_rv(
self,
workdir: Union[str, Path],
modelname: Optional[str] = None,
overwrite: bool = False,
header: bool = True,
):
"""
Write configuration files to disk.
Parameters
----------
workdir : str, Path
A directory where rv files will be written to disk.
modelname : str
File name stem for rv files. If not given, defaults to `RunName` if set, otherwise `raven`.
overwrite : bool
If True, overwrite existing configuration files.
header : bool
If True, write a header at the top of each RV file.
"""
workdir = Path(workdir)
if not workdir.exists():
workdir.mkdir(parents=True)
mandatory = ["rvi", "rvp", "rvc", "rvh", "rvt"]
optional = ["rve"]
if modelname is None:
modelname = self.run_name or "raven"
out = {}
for rv in mandatory + optional:
fn = workdir / f"{modelname}.{rv}"
if fn.exists() and not overwrite:
raise OSError(f"{fn} already exists and would be overwritten.")
# RV header
text = self.header(rv) if header else ""
# RV content
text += self._rv(rv)
# Write to disk
if rv in mandatory or text.strip():
fn.write_text(text)
out[rv] = fn
return out
def zip(
self,
workdir: Union[str, Path],
modelname: Optional[str] = None,
overwrite: bool = False,
):
"""
Write configuration to zip file.
Parameters
----------
workdir : Path, str
Path to zip archive storing RV files.
modelname : str, optional
File name stem for rv files. If not given, defaults to `RunName` if set, otherwise `raven`.
overwrite : bool
If True, overwrite existing configuration zip file.
"""
workdir = Path(workdir)
if not workdir.exists():
workdir.mkdir(parents=True)
if modelname is None:
modelname = self.run_name or "raven"
fn = workdir / f"{modelname}.zip"
if fn.exists() and not overwrite:
raise OSError(f"{fn} already exists and would be overwritten.")
with zipfile.ZipFile(fn, "w") as fh:
for rv in ["rvi", "rvp", "rvc", "rvh", "rvt", "rve"]:
f = f"{modelname}.{rv}"
txt = self._rv(rv)
if txt.strip():
fh.writestr(f, txt)
return zip
def is_symbolic(params: Union[dict, Any]) -> bool:
"""Return True if parameters include a symbolic variable."""
from pymbolic.primitives import Variable
if is_dataclass(params) and not isinstance(params, type):
params = {field.name: getattr(params, field.name) for field in fields(params)}
return any([isinstance(v, Variable) for v in params.values()])