Merge pull request #1418 from CamDavidsonPilon/v0.27.1

v0.27.1

Author: CamDavidsonPilon

.github/CODE_OF_CONDUCT.md

@@ -1,5 +1,7 @@
 # Contributor Code of Conduct
 
+**If you support or allow fascism, racism, or misogyny: don’t use this code, don’t open issues, don’t ask for help.**
+
 As contributors and maintainers of this project, and in the interest of
 fostering an open and welcoming community, we pledge to respect all people who
 contribute through reporting issues, posting feature requests, updating

.github/workflows/ci.yaml

@@ -0,0 +1,29 @@
+name: CI
+
+on: [pull_request, push, workflow_dispatch]
+
+jobs:
+  test:
+    runs-on: ${{ matrix.os }}
+    strategy:
+      fail-fast: true
+      matrix:
+        os: ["ubuntu-latest"]
+        python-version: ["3.9", "3.10"]
+
+    steps:
+      - name: Checkout source
+        uses: actions/checkout@v2
+
+      - name: Setup python
+        uses: actions/setup-python@v2
+        with:
+          python-version: ${{ matrix.python-version }}
+
+      - name: Install
+        run: |
+          pip install -e .
+          pip install -r reqs/dev-requirements.txt
+
+      - name: Run tests
+        run: pytest lifelines/tests/ -vv

CHANGELOG.md

@@ -1,5 +1,17 @@
 ## Changelog
 
+#### 0.27.1 - 2022-03-15
+
+##### New features
+ - all `fit_` methods now accept a `fit_options` dict that allows one to pass kwargs to the underlying fitting algorithm.
+
+
+##### API Changes
+ - `step_size` is removed from Cox models `fit`. See `fit_options` above.
+
+##### Bug fixes
+ - fixed Cox models when "trival" matrix was passed in (one with no covariates)
+
 #### 0.27.0 - 2022-03-15
 
 Dropping Python3.6 support.

README.md

@@ -2,8 +2,6 @@
 
 [![PyPI version](https://badge.fury.io/py/lifelines.svg)](https://badge.fury.io/py/lifelines)
 [![Anaconda-Server Badge](https://anaconda.org/conda-forge/lifelines/badges/installer/conda.svg)](https://conda.anaconda.org/conda-forge)
-[![Build Status](https://travis-ci.org/CamDavidsonPilon/lifelines.svg?branch=master)](https://travis-ci.org/CamDavidsonPilon/lifelines)
-[![Coverage Status](https://coveralls.io/repos/github/CamDavidsonPilon/lifelines/badge.svg?branch=master)](https://coveralls.io/github/CamDavidsonPilon/lifelines?branch=master)
 [![DOI](https://zenodo.org/badge/12420595.svg)](https://zenodo.org/badge/latestdoi/12420595)
 
 
@@ -28,9 +26,6 @@ If you are new to survival analysis, wondering why it is useful, or are interest
  - Some users have posted common questions at [stats.stackexchange.com](https://stats.stackexchange.com/search?tab=votes&q=%22lifelines%22%20is%3aquestion)
  - creating an issue in the [Github repository](https://github.com/camdavidsonpilon/lifelines).
 
-## Roadmap
-You can find the roadmap for lifelines [here](https://www.notion.so/camdp/6e2965207f564eb2a3e48b5937873c14?v=47edda47ab774ca2ac7532bb0c750559).
-
 ## Development
 
 See our [Contributing](https://github.com/CamDavidsonPilon/lifelines/blob/master/.github/CONTRIBUTING.md) guidelines.