Changing output of summary statistics into a dataframe

[wangarikiarie]

Hello!

I was wondering if anyone had some thoughts on this. I have fitted a CoxPHFitter to my data and have the summary results. I want to change the summary statistics into a data frame so that I can pick the variables which are significant. Is there a way to do this in lifelines?

The equivalent of this in a regression would be changing it to HTML and then reading it. Something along the lines of:

results_summary = results.summary()
results_as_html = results_summary.tables[1].as_html()
pd.read_html(results_as_html, header=0, index_col=0)[0]

[CamDavidsonPilon]

Hi @wangarikiarie,

does results.summary give you what you are looking for? https://github.com/CamDavidsonPilon/lifelines/blob/master/lifelines/fitters/coxph_fitter.py#L2167

[wangarikiarie]

Absolutely! This works. Thank you!