Merge pull request #80 from ChEB-AI/remove_protein_codebase

Remove protein codebase

Author: sfluegel05

.github/workflows/token_consistency.yaml

@@ -13,21 +13,17 @@ on:
       - "chebai/preprocessing/bin/smiles_token/tokens.txt"
       - "chebai/preprocessing/bin/smiles_token_unlabeled/tokens.txt"
       - "chebai/preprocessing/bin/selfies/tokens.txt"
-      - "chebai/preprocessing/bin/protein_token/tokens.txt"
       - "chebai/preprocessing/bin/graph_properties/tokens.txt"
       - "chebai/preprocessing/bin/graph/tokens.txt"
       - "chebai/preprocessing/bin/deepsmiles_token/tokens.txt"
-      - "chebai/preprocessing/bin/protein_token_3_gram/tokens.txt"
   pull_request:
     paths:
       - "chebai/preprocessing/bin/smiles_token/tokens.txt"
       - "chebai/preprocessing/bin/smiles_token_unlabeled/tokens.txt"
       - "chebai/preprocessing/bin/selfies/tokens.txt"
-      - "chebai/preprocessing/bin/protein_token/tokens.txt"
       - "chebai/preprocessing/bin/graph_properties/tokens.txt"
       - "chebai/preprocessing/bin/graph/tokens.txt"
       - "chebai/preprocessing/bin/deepsmiles_token/tokens.txt"
-      - "chebai/preprocessing/bin/protein_token_3_gram/tokens.txt"
 
 jobs:
   check_tokens:
@@ -58,11 +54,9 @@ jobs:
             "chebai/preprocessing/bin/smiles_token/tokens.txt"
             "chebai/preprocessing/bin/smiles_token_unlabeled/tokens.txt"
             "chebai/preprocessing/bin/selfies/tokens.txt"
-            "chebai/preprocessing/bin/protein_token/tokens.txt"
             "chebai/preprocessing/bin/graph_properties/tokens.txt"
             "chebai/preprocessing/bin/graph/tokens.txt"
             "chebai/preprocessing/bin/deepsmiles_token/tokens.txt"
-            "chebai/preprocessing/bin/protein_token_3_gram/tokens.txt"
           )
           echo "TOKENS_FILES=${TOKENS_FILES[*]}" >> $GITHUB_ENV