|
153 | 153 | }, |
154 | 154 | { |
155 | 155 | "cell_type": "code", |
156 | | - "execution_count": null, |
| 156 | + "execution_count": 14, |
157 | 157 | "id": "d0a58e2bd9c0e6d9", |
158 | 158 | "metadata": {}, |
159 | | - "outputs": [], |
| 159 | + "outputs": [ |
| 160 | + { |
| 161 | + "name": "stdout", |
| 162 | + "output_type": "stream", |
| 163 | + "text": [ |
| 164 | + "Checking for processed data in data\\chebi_v231\\ChEBI50\\processed\n", |
| 165 | + "Missing processed data file (`data.pkl` file)\n", |
| 166 | + "Missing raw chebi data related to version: v_231, Downloading...\n", |
| 167 | + "Compute transitive closure\n", |
| 168 | + "Process graph\n" |
| 169 | + ] |
| 170 | + }, |
| 171 | + { |
| 172 | + "name": "stderr", |
| 173 | + "output_type": "stream", |
| 174 | + "text": [ |
| 175 | + "Check for processed data in data\\chebi_v231\\ChEBI50\\processed\\smiles_token\n", |
| 176 | + "Cross-validation enabled: False\n" |
| 177 | + ] |
| 178 | + }, |
| 179 | + { |
| 180 | + "name": "stdout", |
| 181 | + "output_type": "stream", |
| 182 | + "text": [ |
| 183 | + "Missing transformed data (`data.pt` file). Transforming data.... \n", |
| 184 | + "Processing 185007 lines...\n" |
| 185 | + ] |
| 186 | + }, |
| 187 | + { |
| 188 | + "name": "stderr", |
| 189 | + "output_type": "stream", |
| 190 | + "text": [ |
| 191 | + "100%|█████████████████████████████████████████████████████████████████████████| 185007/185007 [05:43<00:00, 539.23it/s]\n" |
| 192 | + ] |
| 193 | + }, |
| 194 | + { |
| 195 | + "name": "stdout", |
| 196 | + "output_type": "stream", |
| 197 | + "text": [ |
| 198 | + "saving 771 tokens to G:\\github-aditya0by0\\python-chebai\\chebai\\preprocessing\\bin\\smiles_token\\tokens.txt...\n", |
| 199 | + "first 10 tokens: ['[*-]', '[Al-]', '[F-]', '.', '[H]', '[N]', '(', ')', '[Ag+]', 'C']\n" |
| 200 | + ] |
| 201 | + } |
| 202 | + ], |
160 | 203 | "source": [ |
161 | 204 | "chebi_class.prepare_data()\n", |
162 | 205 | "chebi_class.setup()" |
|
0 commit comments