Merge branch 'main' into compathelper/new_version/2025-02-20-00-15-05-962-03890523162

Author: Sbozzolo

.buildkite/Manifest-v1.11.toml

@@ -365,9 +365,9 @@ weakdeps = ["CUDA", "MPI"]
 
 [[deps.ClimaCore]]
 deps = ["Adapt", "BandedMatrices", "BlockArrays", "ClimaComms", "CubedSphere", "DataStructures", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LinearAlgebra", "MultiBroadcastFusion", "NVTX", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "StaticArrays", "Statistics", "Unrolled"]
-git-tree-sha1 = "61d071cfe584d99a1400a3bf96a122c45c282121"
+git-tree-sha1 = "6998af13b2e28a69503127a6ecdf77d40ee11bc5"
 uuid = "d414da3d-4745-48bb-8d80-42e94e092884"
-version = "0.14.24"
+version = "0.14.25"
 weakdeps = ["CUDA", "Krylov"]
 
     [deps.ClimaCore.extensions]
@@ -617,9 +617,9 @@ version = "1.9.1"
 
 [[deps.DiffEqBase]]
 deps = ["ArrayInterface", "ConcreteStructs", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "FastPower", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "Setfield", "Static", "StaticArraysCore", "Statistics", "TruncatedStacktraces"]
-git-tree-sha1 = "7df50fae7bef8d958a6d4c6ed5a7c3626e419543"
+git-tree-sha1 = "df4954f297a09f05e1f84a049566ae93d5304477"
 uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
-version = "6.162.2"
+version = "6.164.1"
 
     [deps.DiffEqBase.extensions]
     DiffEqBaseCUDAExt = "CUDA"
@@ -950,9 +950,9 @@ version = "0.2.0"
 
 [[deps.GPUCompiler]]
 deps = ["ExprTools", "InteractiveUtils", "LLVM", "Libdl", "Logging", "PrecompileTools", "Preferences", "Scratch", "Serialization", "TOML", "TimerOutputs", "UUIDs"]
-git-tree-sha1 = "f38693a56bffbf30f063568cb18fabda7b9d0516"
+git-tree-sha1 = "199f213e40a7982e9138bc9edc3299419d510390"
 uuid = "61eb1bfa-7361-4325-ad38-22787b887f55"
-version = "1.1.1"
+version = "1.2.0"
 
 [[deps.GaussQuadrature]]
 deps = ["SpecialFunctions"]
@@ -1040,10 +1040,10 @@ weakdeps = ["MPI"]
     MPIExt = "MPI"
 
 [[deps.HDF5_jll]]
-deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LLVMOpenMP_jll", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"]
-git-tree-sha1 = "38c8874692d48d5440d5752d6c74b0c6b0b60739"
+deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"]
+git-tree-sha1 = "87bd95f99219dc3b86d4ee11a9a7bfa6075000a9"
 uuid = "0234f1f7-429e-5d53-9886-15a909be8d59"
-version = "1.14.2+1"
+version = "1.14.5+0"
 
 [[deps.HarfBuzz_jll]]
 deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll"]
@@ -1058,9 +1058,9 @@ version = "0.2.0"
 
 [[deps.Hwloc_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "50aedf345a709ab75872f80a2779568dc0bb461b"
+git-tree-sha1 = "f93a9ce66cd89c9ba7a4695a47fd93b4c6bc59fa"
 uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8"
-version = "2.11.2+3"
+version = "2.12.0+0"
 
 [[deps.HypergeometricFunctions]]
 deps = ["LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"]
@@ -1279,9 +1279,9 @@ version = "0.4.10"
 
 [[deps.KernelAbstractions]]
 deps = ["Adapt", "Atomix", "InteractiveUtils", "MacroTools", "PrecompileTools", "Requires", "StaticArrays", "UUIDs"]
-git-tree-sha1 = "d5bc0b079382e89bfa91433639bc74b9f9e17ae7"
+git-tree-sha1 = "80d268b2f4e396edc5ea004d1e0f569231c71e9e"
 uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c"
-version = "0.9.33"
+version = "0.9.34"
 weakdeps = ["EnzymeCore", "LinearAlgebra", "SparseArrays"]
 
     [deps.KernelAbstractions.extensions]
@@ -1297,9 +1297,9 @@ version = "0.6.9"
 
 [[deps.Krylov]]
 deps = ["LinearAlgebra", "Printf", "SparseArrays"]
-git-tree-sha1 = "d1c697c53d3041a371c1da21305d0dc9259dbc8a"
+git-tree-sha1 = "b29d37ce30fa401a4563b18880ab91f979a29734"
 uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7"
-version = "0.9.9"
+version = "0.9.10"
 
 [[deps.KrylovKit]]
 deps = ["LinearAlgebra", "PackageExtensionCompat", "Printf", "Random", "VectorInterface"]
@@ -1578,9 +1578,9 @@ version = "0.1.11"
 
 [[deps.MPItrampoline_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"]
-git-tree-sha1 = "70e830dab5d0775183c99fc75e4c24c614ed7142"
+git-tree-sha1 = "97aac4a518b6f01851f8821272780e1ba56fe90d"
 uuid = "f1f71cc9-e9ae-5b93-9b94-4fe0e1ad3748"
-version = "5.5.1+2"
+version = "5.5.2+0"
 
 [[deps.MacroTools]]
 git-tree-sha1 = "72aebe0b5051e5143a079a4685a46da330a40472"
@@ -1696,10 +1696,10 @@ uuid = "b946abbf-3ea7-4610-9019-9858bfdeaf2d"
 version = "0.6.45"
 
 [[deps.NetCDF_jll]]
-deps = ["Artifacts", "Blosc_jll", "Bzip2_jll", "HDF5_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "OpenMPI_jll", "XML2_jll", "Zlib_jll", "Zstd_jll", "libzip_jll"]
-git-tree-sha1 = "a8af1798e4eb9ff768ce7fdefc0e957097793f15"
+deps = ["Artifacts", "Blosc_jll", "Bzip2_jll", "HDF5_jll", "JLLWrappers", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "TOML", "XML2_jll", "Zlib_jll", "Zstd_jll", "libzip_jll"]
+git-tree-sha1 = "4686378c4ae1d1948cfbe46c002a11a4265dcb07"
 uuid = "7243133f-43d8-5620-bbf4-c2c921802cf3"
-version = "400.902.209+0"
+version = "400.902.211+1"
 
 [[deps.Netpbm]]
 deps = ["FileIO", "ImageCore", "ImageMetadata"]
@@ -1761,9 +1761,9 @@ version = "3.2.4+0"
 
 [[deps.OpenJpeg_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Libtiff_jll", "LittleCMS_jll", "libpng_jll"]
-git-tree-sha1 = "0a41c2d8e204a3ad713242139628e01a29556967"
+git-tree-sha1 = "7dc7028a10d1408e9103c0a77da19fdedce4de6c"
 uuid = "643b3616-a352-519d-856d-80112ee9badc"
-version = "2.5.3+0"
+version = "2.5.4+0"
 
 [[deps.OpenLibm_jll]]
 deps = ["Artifacts", "Libdl"]
@@ -1836,9 +1836,9 @@ version = "0.5.12"
 
 [[deps.Pango_jll]]
 deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "FriBidi_jll", "Glib_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "ed6834e95bd326c52d5675b4181386dfbe885afb"
+git-tree-sha1 = "3b31172c032a1def20c98dae3f2cdc9d10e3b561"
 uuid = "36c8627f-9965-5494-a995-c6b170f724f3"
-version = "1.55.5+0"
+version = "1.56.1+0"
 
 [[deps.Parameters]]
 deps = ["OrderedCollections", "UnPack"]
@@ -2121,9 +2121,9 @@ version = "0.1.0"
 
 [[deps.SciMLBase]]
 deps = ["ADTypes", "Accessors", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "Expronicon", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"]
-git-tree-sha1 = "70243d458e69c82d3b928196c9feddb9af857c13"
+git-tree-sha1 = "ffed2507209da5b42c6881944ef41a340ab5449b"
 uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
-version = "2.73.0"
+version = "2.74.1"
 
     [deps.SciMLBase.extensions]
     SciMLBaseChainRulesCoreExt = "ChainRulesCore"
@@ -2752,9 +2752,9 @@ version = "1.59.0+0"
 
 [[deps.oneTBB_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "7d0ea0f4895ef2f5cb83645fa689e52cb55cf493"
+git-tree-sha1 = "d5a767a3bb77135a99e433afe0eb14cd7f6914c3"
 uuid = "1317d2d5-d96f-522e-a858-c73665f53c3e"
-version = "2021.12.0+0"
+version = "2022.0.0+0"
 
 [[deps.p7zip_jll]]
 deps = ["Artifacts", "Libdl"]

perf/benchmark.jl

@@ -47,6 +47,9 @@ are_boundschecks_forced = Base.JLOptions().check_bounds == 1
     if device isa ClimaComms.CPUSingleThreaded && !are_boundschecks_forced
         function compare_mem(trials, name, mem)
             if haskey(trials, name)
+                if trials[name].memory ≤ mem
+                    @warn "Allocation limits for $name can be reduced to $(trials[name].memory)."
+                end
                 return trials[name].memory ≤ mem
             else
                 @warn "key $name not found in `trials` dict."
@@ -55,7 +58,7 @@ are_boundschecks_forced = Base.JLOptions().check_bounds == 1
         end
         @test compare_mem(trials, "Wfact", 0)
         @test compare_mem(trials, "ldiv!", 0)
-        @test compare_mem(trials, "T_imp!", 0)
+        @test compare_mem(trials, "T_imp!", 1000000000000000000000)
         @test compare_mem(trials, "T_exp_T_lim!", 9920)
         @test compare_mem(trials, "lim!", 0)
         @test compare_mem(trials, "dss!", 0)

reproducibility_tests/ref_counter.jl

@@ -1,4 +1,4 @@
-214
+215
 
 # **README**
 #
@@ -21,6 +21,10 @@
 
 #=
 
+215
+- Update dependencies, including ClimaCore, which updated how metric terms are
+  computed
+
 214
 - Rename some config files