use td release

Author: szy21

.buildkite/Manifest-v1.11.toml

@@ -1,8 +1,8 @@
 # This file is machine-generated - editing it directly is not advised
 
-julia_version = "1.11.3"
+julia_version = "1.11.5"
 manifest_format = "2.0"
-project_hash = "8bcb542dc9e16343e9240fc683cbcf4c2dd449eb"
+project_hash = "04945e2a7116cfacb2d57340f477dbe23e208227"
 
 [[deps.ADTypes]]
 git-tree-sha1 = "be7ae030256b8ef14a441726c4c37766b90b93a3"
@@ -1818,7 +1818,7 @@ version = "2.5.4+0"
 [[deps.OpenLibm_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "05823500-19ac-5b8b-9628-191a04bc5112"
-version = "0.8.1+2"
+version = "0.8.5+0"
 
 [[deps.OpenMPI_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "Hwloc_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML", "Zlib_jll"]
@@ -2539,10 +2539,8 @@ uuid = "b718987f-49a8-5099-9789-dcd902bef87d"
 version = "1.0.2"
 
 [[deps.Thermodynamics]]
-deps = ["DocStringExtensions", "ForwardDiff", "KernelAbstractions", "Random", "RootSolvers"]
-git-tree-sha1 = "9acfaea2c827b92f6acb38e04d7d5b6858cd4e26"
-repo-rev = "zs/test_derivatives"
-repo-url = "https://github.com/CliMA/Thermodynamics.jl.git"
+deps = ["DocStringExtensions", "KernelAbstractions", "Random", "RootSolvers"]
+git-tree-sha1 = "bff801ad0a9bbb5c1bf38ffe89a83907a1b145cd"
 uuid = "b60c26fb-14c3-4610-9d3e-2d17fe7ff00c"
 version = "0.12.15"
 weakdeps = ["ClimaParams"]

.buildkite/Project.toml

@@ -11,12 +11,10 @@ ClimaCore = "d414da3d-4745-48bb-8d80-42e94e092884"
 ClimaCoreSpectra = "c2caaa1d-32ae-4754-ba0d-80e7561362e9"
 ClimaCoreTempestRemap = "d934ef94-cdd4-4710-83d6-720549644b70"
 ClimaDiagnostics = "1ecacbb8-0713-4841-9a07-eb5aa8a2d53f"
-ClimaParams = "5c42b081-d73a-476f-9059-fd94b934656c"
 ClimaReproducibilityTests = "e0c89595-00ba-42a9-9f9b-061ef3dc23a1"
 ClimaTimeSteppers = "595c0a79-7f3d-439a-bc5a-b232dc3bde79"
 ClimaUtilities = "b3f4f4ca-9299-4f7f-bd9b-81e1242a7513"
 DiffEqBase = "2b5f629d-d688-5b77-993f-72d75c75574e"
-ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
 HDF5 = "f67ccb44-e63f-5c2f-98bd-6dc0ccc4ba2f"
 Interpolations = "a98d9a8b-a2ab-59e6-89dd-64a1c18fca59"
 IntervalSets = "8197267c-284f-5f27-9208-e0e47529a953"
@@ -40,7 +38,6 @@ SnoopCompileCore = "e2b509da-e806-4183-be48-004708413034"
 Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
 StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
 Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
-Thermodynamics = "b60c26fb-14c3-4610-9d3e-2d17fe7ff00c"
 YAML = "ddb6d928-2868-570f-bddf-ab3f9cf99eb6"
 
 [compat]

.buildkite/pipeline.yml

@@ -307,8 +307,8 @@ steps:
   #       agents:
   #         slurm_mem: 16GB
 
-  - group: "Sphere Examples (Dycore)"
-    steps:
+  # - group: "Sphere Examples (Dycore)"
+  #   steps:
 
   #     - label: ":computer: hydrostatic balance float64"
   #       command: >
@@ -343,25 +343,25 @@ steps:
   #         --job_id baroclinic_wave_sparse_autodiff
   #       artifact_paths: "baroclinic_wave_sparse_autodiff/output_active/*"
 
-      - label: ":computer: no lim baroclinic wave equilmoist"
-        command: >
-          julia --color=yes --project=.buildkite .buildkite/ci_driver.jl
-          --config_file $CONFIG_PATH/baroclinic_wave_equil.yml
-          --job_id baroclinic_wave_equil
-
-          julia --color=yes --project=.buildkite reproducibility_tests/test_mse.jl
-          --job_id baroclinic_wave_equil
-          --out_dir baroclinic_wave_equil/output_active
-        artifact_paths: "baroclinic_wave_equil/output_active/*"
-        agents:
-          slurm_constraint: icelake|cascadelake|skylake|epyc
+      # - label: ":computer: no lim baroclinic wave equilmoist"
+      #   command: >
+      #     julia --color=yes --project=.buildkite .buildkite/ci_driver.jl
+      #     --config_file $CONFIG_PATH/baroclinic_wave_equil.yml
+      #     --job_id baroclinic_wave_equil
+
+      #     julia --color=yes --project=.buildkite reproducibility_tests/test_mse.jl
+      #     --job_id baroclinic_wave_equil
+      #     --out_dir baroclinic_wave_equil/output_active
+      #   artifact_paths: "baroclinic_wave_equil/output_active/*"
+      #   agents:
+      #     slurm_constraint: icelake|cascadelake|skylake|epyc
 
-      - label: ":computer: no lim baroclinic wave nonequilmoist"
-        command: >
-          julia --color=yes --project=.buildkite .buildkite/ci_driver.jl
-          --config_file $CONFIG_PATH/baroclinic_wave_nonequil.yml
-          --job_id baroclinic_wave_nonequil
-        artifact_paths: "baroclinic_wave_nonequil/output_active/*"
+      # - label: ":computer: no lim baroclinic wave nonequilmoist"
+      #   command: >
+      #     julia --color=yes --project=.buildkite .buildkite/ci_driver.jl
+      #     --config_file $CONFIG_PATH/baroclinic_wave_nonequil.yml
+      #     --job_id baroclinic_wave_nonequil
+      #   artifact_paths: "baroclinic_wave_nonequil/output_active/*"
 
 
   #     - label: ":computer: held suarez"

config/default_configs/default_config.yml

@@ -91,16 +91,16 @@ use_dense_jacobian:
   value: false
 use_auto_jacobian:
   help: "Whether to populate the entries of the sparse Jacobian matrix using forward-mode automatic differentiation with sparse matrix coloring (only used when `use_dense_jacobian` is `false`) [`true`, `false` (default)]"
-  value: true
+  value: false
 auto_jacobian_padding_bands:
   help: "Target number of bands to add in every block of the sparse Jacobian matrix, eliminating errors from Jacobian entries that lie outside of the default sparsity pattern; when unspecified, each block gets a predetermined number of padding bands based on the typical magnitudes of its entries (only used when `use_auto_jacobian` is `true`)"
   value: ~
 update_jacobian_every:
   help: "Frequency at which the Jacobian matrix should be updated (once per timestep, once per timestepper stage, or once per linear solve) [`dt`, `stage`, `solve` (default)]"
-  value: "dt"
+  value: "solve"
 debug_jacobian:
   help: "Whether to print summary information about the Jacobian matrix, including comparisons of different algorithms evaluated on the first column of the final state against the exact Jacobian [`true`, `false` (default)]"
-  value: true
+  value: false
 # Radiation
 rad:
   help: "Radiation model [`nothing` (default), `gray`, `clearsky`, `allsky`, `allskywithclear`]"

config/model_configs/baroclinic_wave_nonequil.yml

@@ -2,7 +2,7 @@ precip_model: "1M"
 dt_save_state_to_disk: "2days"
 initial_condition: "MoistBaroclinicWave"
 dt: "450secs"
-t_end: "10days"
+t_end: "2days"
 moist: "nonequil"
 disable_surface_flux_tendency: true
 diagnostics: