Update Manifests to use latest ClimaAtmos

Author: imreddyTeja

experiments/ClimaCore/Manifest-v1.11.toml

@@ -5,9 +5,9 @@ manifest_format = "2.0"
 project_hash = "ad754c4de2c5018aafa70f420d0cb2fa7d55629c"
 
 [[deps.ADTypes]]
-git-tree-sha1 = "be7ae030256b8ef14a441726c4c37766b90b93a3"
+git-tree-sha1 = "60665b326b75db6517939d0e1875850bc4a54368"
 uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b"
-version = "1.15.0"
+version = "1.17.0"
 weakdeps = ["ChainRulesCore", "ConstructionBase", "EnzymeCore"]
 
     [deps.ADTypes.extensions]
@@ -135,9 +135,9 @@ version = "1.11.0"
 
 [[deps.Atomix]]
 deps = ["UnsafeAtomics"]
-git-tree-sha1 = "b5bb4dc6248fde467be2a863eb8452993e74d402"
+git-tree-sha1 = "29bb0eb6f578a587a49da16564705968667f5fa8"
 uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458"
-version = "1.1.1"
+version = "1.1.2"
 
     [deps.Atomix.extensions]
     AtomixCUDAExt = "CUDA"
@@ -221,10 +221,10 @@ uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82"
 version = "0.5.0"
 
 [[deps.CPUSummary]]
-deps = ["CpuId", "IfElse", "PrecompileTools", "Static"]
-git-tree-sha1 = "5a97e67919535d6841172016c9530fd69494e5ec"
+deps = ["CpuId", "IfElse", "PrecompileTools", "Preferences", "Static"]
+git-tree-sha1 = "f3a21d7fc84ba618a779d1ed2fcca2e682865bab"
 uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9"
-version = "0.2.6"
+version = "0.2.7"
 
 [[deps.CRC32c]]
 uuid = "8bf52ea8-c179-5cab-976a-9e18b702a9bc"
@@ -262,19 +262,19 @@ version = "1.18.5+0"
 
 [[deps.ChainRulesCore]]
 deps = ["Compat", "LinearAlgebra"]
-git-tree-sha1 = "06ee8d1aa558d2833aa799f6f0b31b30cada405f"
+git-tree-sha1 = "e4c6a16e77171a5f5e25e9646617ab1c276c5607"
 uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
-version = "1.25.2"
+version = "1.26.0"
 weakdeps = ["SparseArrays"]
 
     [deps.ChainRulesCore.extensions]
     ChainRulesCoreSparseArraysExt = "SparseArrays"
 
 [[deps.ClimaComms]]
 deps = ["Adapt", "Logging", "LoggingExtras"]
-git-tree-sha1 = "75b9d1a3b4e3efa2cbbae2eb7b52f14c0b38ccf0"
+git-tree-sha1 = "f3961fa943c1bbbc376af910cb98db67084dc642"
 uuid = "3a4d1b5c-c61d-41fd-a00a-5873ba7a1b0d"
-version = "0.6.8"
+version = "0.6.9"
 
     [deps.ClimaComms.extensions]
     ClimaCommsCUDAExt = "CUDA"
@@ -286,9 +286,9 @@ version = "0.6.8"
 
 [[deps.ClimaCore]]
 deps = ["Adapt", "BandedMatrices", "BlockArrays", "ClimaComms", "CubedSphere", "DataStructures", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LazyBroadcast", "LinearAlgebra", "MultiBroadcastFusion", "NVTX", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "StaticArrays", "Statistics", "UnrolledUtilities"]
-git-tree-sha1 = "a273452127dbb052f2963e3c1095730a996d49a6"
+git-tree-sha1 = "f9c4a2b43410bff9f33301eeb7664350014ce593"
 uuid = "d414da3d-4745-48bb-8d80-42e94e092884"
-version = "0.14.36"
+version = "0.14.39"
 
     [deps.ClimaCore.extensions]
     ClimaCoreCUDAExt = "CUDA"
@@ -328,9 +328,9 @@ version = "0.8.5"
 
 [[deps.ClimaUtilities]]
 deps = ["Artifacts", "ClimaComms", "Dates"]
-git-tree-sha1 = "420fe76968208ac2eb2837e9e0f0974456ebec78"
+git-tree-sha1 = "fe1a7b3143f11c017118d3c99f067a09cb622f81"
 uuid = "b3f4f4ca-9299-4f7f-bd9b-81e1242a7513"
-version = "0.1.24"
+version = "0.1.26"
 
     [deps.ClimaUtilities.extensions]
     ClimaUtilitiesClimaCoreExt = "ClimaCore"
@@ -405,9 +405,9 @@ version = "1.0.0"
 
 [[deps.Compat]]
 deps = ["TOML", "UUIDs"]
-git-tree-sha1 = "3a3dfb30697e96a440e4149c8c51bf32f818c0f3"
+git-tree-sha1 = "0037835448781bb46feb39866934e243886d756a"
 uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
-version = "4.17.0"
+version = "4.18.0"
 weakdeps = ["Dates", "LinearAlgebra"]
 
     [deps.Compat.extensions]
@@ -494,9 +494,9 @@ version = "1.6.4"
 
 [[deps.DiffEqBase]]
 deps = ["ArrayInterface", "ConcreteStructs", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "FastPower", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "Setfield", "Static", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "TruncatedStacktraces"]
-git-tree-sha1 = "52af5ee5af4eb6ca03b3782bf65c1e5fc3024c86"
+git-tree-sha1 = "1b1e070e57681d1176d99a5ec455717e24686612"
 uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
-version = "6.178.0"
+version = "6.183.2"
 
     [deps.DiffEqBase.extensions]
     DiffEqBaseCUDAExt = "CUDA"
@@ -534,9 +534,9 @@ version = "6.178.0"
 
 [[deps.DiffEqCallbacks]]
 deps = ["ConcreteStructs", "DataStructures", "DiffEqBase", "DifferentiationInterface", "Functors", "LinearAlgebra", "Markdown", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"]
-git-tree-sha1 = "80a782f3e65d4900dcf5f2cb71f5e19d9459c04a"
+git-tree-sha1 = "397ef6fffcf418ba55264ba785b032b8a136903b"
 uuid = "459566f4-90b8-5000-8ac3-15dfb0a30def"
-version = "4.8.0"
+version = "4.9.0"
 
 [[deps.DiffResults]]
 deps = ["StaticArraysCore"]
@@ -552,9 +552,9 @@ version = "1.15.1"
 
 [[deps.DifferentiationInterface]]
 deps = ["ADTypes", "LinearAlgebra"]
-git-tree-sha1 = "f620da805b82bec64ab4d5f881c7592c82dbc08a"
+git-tree-sha1 = "38989b1532a3c6e2341d52b77c5475c42c3318a8"
 uuid = "a0c0ee7d-e4b9-4e03-894e-1c5f64a51d63"
-version = "0.7.3"
+version = "0.7.6"
 
     [deps.DifferentiationInterface.extensions]
     DifferentiationInterfaceChainRulesCoreExt = "ChainRulesCore"
@@ -1304,9 +1304,9 @@ version = "1.11.0"
 
 [[deps.LinearOperators]]
 deps = ["FastClosures", "LinearAlgebra", "Printf", "Requires", "SparseArrays", "TimerOutputs"]
-git-tree-sha1 = "1894a798ed8887895c5ae70f1fe8331c0c1d8480"
+git-tree-sha1 = "db137007d2c4ed948aa5f2518a2b451851ea8bda"
 uuid = "5c8ed15e-5a4c-59e4-a42b-c7e8811fb125"
-version = "2.10.0"
+version = "2.11.0"
 
     [deps.LinearOperators.extensions]
     LinearOperatorsAMDGPUExt = "AMDGPU"
@@ -1408,9 +1408,9 @@ version = "1.11.0"
 
 [[deps.MathTeXEngine]]
 deps = ["AbstractTrees", "Automa", "DataStructures", "FreeTypeAbstraction", "GeometryBasics", "LaTeXStrings", "REPL", "RelocatableFolders", "UnicodeFun"]
-git-tree-sha1 = "6e64d2321257cc52f47e193407d0659ea1b2b431"
+git-tree-sha1 = "a370fef694c109e1950836176ed0d5eabbb65479"
 uuid = "0a4f8689-d25c-4efe-a92b-7142dfc1aa53"
-version = "0.6.5"
+version = "0.6.6"
 
 [[deps.MbedTLS_jll]]
 deps = ["Artifacts", "Libdl"]
@@ -1468,15 +1468,15 @@ version = "0.3.3"
 
 [[deps.NVTX]]
 deps = ["Colors", "JuliaNVTXCallbacks_jll", "Libdl", "NVTX_jll"]
-git-tree-sha1 = "1a24c3430fa2ef3317c4c97fa7e431ef45793bd2"
+git-tree-sha1 = "6b573a3e66decc7fc747afd1edbf083ff78c813a"
 uuid = "5da4648a-3479-48b8-97b9-01cb529c0a1f"
-version = "1.0.0"
+version = "1.0.1"
 
 [[deps.NVTX_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "cd475b587ff77910789a18e68da789fc446a2a05"
+git-tree-sha1 = "af2232f69447494514c25742ba1503ec7e9877fe"
 uuid = "e98f9f5b-d649-5603-91fd-7774390e6439"
-version = "3.2.1+0"
+version = "3.2.2+0"
 
 [[deps.NaNMath]]
 deps = ["OpenLibm_jll"]
@@ -1550,9 +1550,9 @@ version = "5.0.8+0"
 
 [[deps.OpenSSL_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "87510f7292a2b21aeff97912b0898f9553cc5c2c"
+git-tree-sha1 = "2ae7d4ddec2e13ad3bddf5c0796f7547cf682391"
 uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95"
-version = "3.5.1+0"
+version = "3.5.2+0"
 
 [[deps.OpenSpecFun_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl"]
@@ -1668,6 +1668,22 @@ git-tree-sha1 = "77b3d3605fc1cd0b42d95eba87dfcd2bf67d5ff6"
 uuid = "647866c9-e3ac-4575-94e7-e3d426903924"
 version = "0.1.2"
 
+[[deps.PreallocationTools]]
+deps = ["Adapt", "ArrayInterface", "PrecompileTools"]
+git-tree-sha1 = "520070df581845686c8c488b6dadce6b2c316856"
+uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46"
+version = "0.4.32"
+
+    [deps.PreallocationTools.extensions]
+    PreallocationToolsForwardDiffExt = "ForwardDiff"
+    PreallocationToolsReverseDiffExt = "ReverseDiff"
+    PreallocationToolsSparseConnectivityTracerExt = "SparseConnectivityTracer"
+
+    [deps.PreallocationTools.weakdeps]
+    ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
+    ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267"
+    SparseConnectivityTracer = "9f842d2f-2579-4b1d-911e-f412cf18a3f5"
+
 [[deps.PrecompileTools]]
 deps = ["Preferences"]
 git-tree-sha1 = "5aa36f7049a63a1528fe8f7c3f2113413ffd4e1f"
@@ -1676,9 +1692,9 @@ version = "1.2.1"
 
 [[deps.Preferences]]
 deps = ["TOML"]
-git-tree-sha1 = "9306f6085165d270f7e3db02af26a400d580f5c6"
+git-tree-sha1 = "0f27480397253da18fe2c12a4ba4eb9eb208bf3d"
 uuid = "21216c6a-2e73-6563-6e65-726566657250"
-version = "1.4.3"
+version = "1.5.0"
 
 [[deps.PrettyTables]]
 deps = ["Crayons", "LaTeXStrings", "Markdown", "PrecompileTools", "Printf", "Reexport", "StringManipulation", "Tables"]
@@ -1753,9 +1769,9 @@ version = "1.3.4"
 
 [[deps.RecursiveArrayTools]]
 deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"]
-git-tree-sha1 = "4dd1a95cc16d5abdccc4eac5faf6bc73904be1a2"
+git-tree-sha1 = "f8726bd5a8b7f5f5d3f6c0ce4793454a599b5243"
 uuid = "731186ca-8d62-57ce-b412-fbd966d074cd"
-version = "3.35.0"
+version = "3.36.0"
 
     [deps.RecursiveArrayTools.extensions]
     RecursiveArrayToolsFastBroadcastExt = "FastBroadcast"
@@ -1812,9 +1828,9 @@ version = "0.5.1+0"
 
 [[deps.RootSolvers]]
 deps = ["ForwardDiff", "Printf"]
-git-tree-sha1 = "892b77767827af30868111d257930f567d5d78f8"
+git-tree-sha1 = "75b130d104fb3d9d39a5c784fad23aebc7d7d956"
 uuid = "7181ea78-2dcb-4de3-ab41-2b8ab5a31e74"
-version = "0.4.4"
+version = "1.0.0"
 
 [[deps.RoundingEmulator]]
 git-tree-sha1 = "40b9edad2e5287e05bd413a38f61a8ff55b9557b"
@@ -1843,10 +1859,10 @@ uuid = "94e857df-77ce-4151-89e5-788b33177be4"
 version = "0.1.0"
 
 [[deps.SciMLBase]]
-deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Moshi", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"]
-git-tree-sha1 = "c9dc4c04bcb0146a35dd6af726073c5738b80e3b"
+deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Moshi", "PreallocationTools", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"]
+git-tree-sha1 = "4398bda451c3c7aaca91a8077bcba227fe236d72"
 uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
-version = "2.104.0"
+version = "2.111.1"
 
     [deps.SciMLBase.extensions]
     SciMLBaseChainRulesCoreExt = "ChainRulesCore"
@@ -1871,9 +1887,9 @@ version = "2.104.0"
 
 [[deps.SciMLOperators]]
 deps = ["Accessors", "ArrayInterface", "DocStringExtensions", "LinearAlgebra", "MacroTools"]
-git-tree-sha1 = "3249fe77f322fe539e935ecb388c8290cd38a3fc"
+git-tree-sha1 = "aea915a39b547c48a18ee041120db1ae8df5a691"
 uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961"
-version = "1.3.1"
+version = "1.5.0"
 weakdeps = ["SparseArrays", "StaticArraysCore"]
 
     [deps.SciMLOperators.extensions]
@@ -1933,9 +1949,9 @@ version = "0.4.0"
 
 [[deps.SimpleTraits]]
 deps = ["InteractiveUtils", "MacroTools"]
-git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231"
+git-tree-sha1 = "be8eeac05ec97d379347584fa9fe2f5f76795bcb"
 uuid = "699a6c99-e7fa-54fc-8d76-47d257e15c1d"
-version = "0.9.4"
+version = "0.9.5"
 
 [[deps.Sixel]]
 deps = ["Dates", "FileIO", "ImageCore", "IndirectArrays", "OffsetArrays", "REPL", "libsixel_jll"]
@@ -1949,9 +1965,9 @@ version = "1.11.0"
 
 [[deps.SortingAlgorithms]]
 deps = ["DataStructures"]
-git-tree-sha1 = "66e0a8e672a0bdfca2c3f5937efb8538b9ddc085"
+git-tree-sha1 = "64d974c2e6fdf07f8155b5b2ca2ffa9069b608d9"
 uuid = "a2af1166-a08f-5f64-846c-94a0d3cef48c"
-version = "1.2.1"
+version = "1.2.2"
 
 [[deps.SparseArrays]]
 deps = ["Libdl", "LinearAlgebra", "Random", "Serialization", "SuiteSparse_jll"]
@@ -2031,9 +2047,9 @@ version = "1.7.1"
 
 [[deps.StatsBase]]
 deps = ["AliasTables", "DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"]
-git-tree-sha1 = "b81c5035922cc89c2d9523afc6c54be512411466"
+git-tree-sha1 = "2c962245732371acd51700dbb268af311bddd719"
 uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
-version = "0.34.5"
+version = "0.34.6"
 
 [[deps.StatsFuns]]
 deps = ["HypergeometricFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"]
@@ -2087,9 +2103,9 @@ version = "7.7.0+0"
 
 [[deps.SurfaceFluxes]]
 deps = ["DocStringExtensions", "RootSolvers", "Thermodynamics"]
-git-tree-sha1 = "aee530bde85cd41374273568cb649e72d82921e7"
+git-tree-sha1 = "eb96fea9de18a3935a836ee8634af3c126d6b77f"
 uuid = "49b00bb7-8bd4-4f2b-b78c-51cd0450215f"
-version = "0.12.0"
+version = "0.12.1"
 
     [deps.SurfaceFluxes.extensions]
     CreateParametersExt = "ClimaParams"
@@ -2098,10 +2114,14 @@ version = "0.12.0"
     ClimaParams = "5c42b081-d73a-476f-9059-fd94b934656c"
 
 [[deps.SymbolicIndexingInterface]]
-deps = ["Accessors", "ArrayInterface", "PrettyTables", "RuntimeGeneratedFunctions", "StaticArraysCore"]
-git-tree-sha1 = "59ca6eddaaa9849e7de9fd1153b6faf0b1db7b80"
+deps = ["Accessors", "ArrayInterface", "RuntimeGeneratedFunctions", "StaticArraysCore"]
+git-tree-sha1 = "93104ca226670c0cb92ba8bc6998852ad55a2d4c"
 uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5"
-version = "0.3.42"
+version = "0.3.43"
+weakdeps = ["PrettyTables"]
+
+    [deps.SymbolicIndexingInterface.extensions]
+    SymbolicIndexingInterfacePrettyTablesExt = "PrettyTables"
 
 [[deps.TOML]]
 deps = ["Dates"]
@@ -2150,10 +2170,10 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
 version = "1.11.0"
 
 [[deps.Thermodynamics]]
-deps = ["DocStringExtensions", "KernelAbstractions", "Random", "RootSolvers"]
-git-tree-sha1 = "bff801ad0a9bbb5c1bf38ffe89a83907a1b145cd"
+deps = ["DocStringExtensions", "ForwardDiff", "KernelAbstractions", "Random", "RootSolvers"]
+git-tree-sha1 = "edce99e94489c25f5c7f5b4065c06ffb5adb1317"
 uuid = "b60c26fb-14c3-4610-9d3e-2d17fe7ff00c"
-version = "0.12.15"
+version = "0.13.1"
 
     [deps.Thermodynamics.extensions]
     CreateParametersExt = "ClimaParams"
@@ -2223,9 +2243,9 @@ version = "0.4.1"
 
 [[deps.Unitful]]
 deps = ["Dates", "LinearAlgebra", "Random"]
-git-tree-sha1 = "d2282232f8a4d71f79e85dc4dd45e5b12a6297fb"
+git-tree-sha1 = "6258d453843c466d84c17a58732dda5deeb8d3af"
 uuid = "1986cc42-f94f-5a68-af5c-568840ba703d"
-version = "1.23.1"
+version = "1.24.0"
 weakdeps = ["ConstructionBase", "ForwardDiff", "InverseFunctions", "Printf"]
 
     [deps.Unitful.extensions]