Merge pull request #1198 from CliMA/gb/updeps

Update dependencies

Author: Sbozzolo

experiments/ClimaCore/Manifest-v1.11.toml

@@ -58,12 +58,13 @@ version = "0.1.41"
 
 [[deps.Adapt]]
 deps = ["LinearAlgebra", "Requires"]
-git-tree-sha1 = "50c3c56a52972d78e8be9fd135bfb91c9574c140"
+git-tree-sha1 = "cd8b948862abee8f3d3e9b73a102a9ca924debb0"
 uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e"
-version = "4.1.1"
-weakdeps = ["StaticArrays"]
+version = "4.2.0"
+weakdeps = ["SparseArrays", "StaticArrays"]
 
     [deps.Adapt.extensions]
+    AdaptSparseArraysExt = "SparseArrays"
     AdaptStaticArraysExt = "StaticArrays"
 
 [[deps.AdaptivePredicates]]
@@ -121,9 +122,9 @@ version = "7.18.0"
 
 [[deps.ArrayLayouts]]
 deps = ["FillArrays", "LinearAlgebra"]
-git-tree-sha1 = "2bf6e01f453284cb61c312836b4680331ddfc44b"
+git-tree-sha1 = "4e25216b8fea1908a0ce0f5d87368587899f75be"
 uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a"
-version = "1.11.0"
+version = "1.11.1"
 weakdeps = ["SparseArrays"]
 
     [deps.ArrayLayouts.extensions]
@@ -276,9 +277,9 @@ version = "0.6.6"
 
 [[deps.ClimaCore]]
 deps = ["Adapt", "BandedMatrices", "BlockArrays", "ClimaComms", "CubedSphere", "DataStructures", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LinearAlgebra", "MultiBroadcastFusion", "NVTX", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "StaticArrays", "Statistics", "Unrolled"]
-git-tree-sha1 = "61d071cfe584d99a1400a3bf96a122c45c282121"
+git-tree-sha1 = "5ab63b77f54c2a2f79cb43a1fd37e086427a8cf1"
 uuid = "d414da3d-4745-48bb-8d80-42e94e092884"
-version = "0.14.24"
+version = "0.14.26"
 
     [deps.ClimaCore.extensions]
     ClimaCoreCUDAExt = "CUDA"
@@ -484,9 +485,9 @@ version = "1.6.4"
 
 [[deps.DiffEqBase]]
 deps = ["ArrayInterface", "ConcreteStructs", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "FastPower", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "Setfield", "Static", "StaticArraysCore", "Statistics", "TruncatedStacktraces"]
-git-tree-sha1 = "7df50fae7bef8d958a6d4c6ed5a7c3626e419543"
+git-tree-sha1 = "df4954f297a09f05e1f84a049566ae93d5304477"
 uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
-version = "6.162.2"
+version = "6.164.1"
 
     [deps.DiffEqBase.extensions]
     DiffEqBaseCUDAExt = "CUDA"
@@ -522,9 +523,9 @@ version = "6.162.2"
 
 [[deps.DiffEqCallbacks]]
 deps = ["ConcreteStructs", "DataStructures", "DiffEqBase", "DifferentiationInterface", "Functors", "LinearAlgebra", "Markdown", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"]
-git-tree-sha1 = "f6bc598f21c7bf2f7885cff9b3c9078e606ab075"
+git-tree-sha1 = "c4966e57a993a181b6d613cf0d267c46fe49139d"
 uuid = "459566f4-90b8-5000-8ac3-15dfb0a30def"
-version = "4.2.2"
+version = "4.3.0"
 
 [[deps.DiffResults]]
 deps = ["StaticArraysCore"]
@@ -540,9 +541,9 @@ version = "1.15.1"
 
 [[deps.DifferentiationInterface]]
 deps = ["ADTypes", "LinearAlgebra"]
-git-tree-sha1 = "087720e4391faac4bc5b5f4315794b3309264c6f"
+git-tree-sha1 = "258fa016b2d03f19e4d0d1cd8e30c84907af1528"
 uuid = "a0c0ee7d-e4b9-4e03-894e-1c5f64a51d63"
-version = "0.6.40"
+version = "0.6.42"
 
     [deps.DifferentiationInterface.extensions]
     DifferentiationInterfaceChainRulesCoreExt = "ChainRulesCore"
@@ -931,10 +932,10 @@ version = "0.17.2"
     MPI = "da04e1cc-30fd-572f-bb4f-1f8673147195"
 
 [[deps.HDF5_jll]]
-deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LLVMOpenMP_jll", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"]
-git-tree-sha1 = "38c8874692d48d5440d5752d6c74b0c6b0b60739"
+deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"]
+git-tree-sha1 = "87bd95f99219dc3b86d4ee11a9a7bfa6075000a9"
 uuid = "0234f1f7-429e-5d53-9886-15a909be8d59"
-version = "1.14.2+1"
+version = "1.14.5+0"
 
 [[deps.HarfBuzz_jll]]
 deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll"]
@@ -944,9 +945,9 @@ version = "8.5.0+0"
 
 [[deps.Hwloc_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "50aedf345a709ab75872f80a2779568dc0bb461b"
+git-tree-sha1 = "f93a9ce66cd89c9ba7a4695a47fd93b4c6bc59fa"
 uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8"
-version = "2.11.2+3"
+version = "2.12.0+0"
 
 [[deps.HypergeometricFunctions]]
 deps = ["LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"]
@@ -1106,9 +1107,9 @@ version = "0.2.1+0"
 
 [[deps.KernelAbstractions]]
 deps = ["Adapt", "Atomix", "InteractiveUtils", "MacroTools", "PrecompileTools", "Requires", "StaticArrays", "UUIDs"]
-git-tree-sha1 = "d5bc0b079382e89bfa91433639bc74b9f9e17ae7"
+git-tree-sha1 = "80d268b2f4e396edc5ea004d1e0f569231c71e9e"
 uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c"
-version = "0.9.33"
+version = "0.9.34"
 weakdeps = ["EnzymeCore", "LinearAlgebra", "SparseArrays"]
 
     [deps.KernelAbstractions.extensions]
@@ -1124,9 +1125,9 @@ version = "0.6.9"
 
 [[deps.Krylov]]
 deps = ["LinearAlgebra", "Printf", "SparseArrays"]
-git-tree-sha1 = "d1c697c53d3041a371c1da21305d0dc9259dbc8a"
+git-tree-sha1 = "b29d37ce30fa401a4563b18880ab91f979a29734"
 uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7"
-version = "0.9.9"
+version = "0.9.10"
 
 [[deps.KrylovKit]]
 deps = ["LinearAlgebra", "PackageExtensionCompat", "Printf", "Random", "VectorInterface"]
@@ -1320,9 +1321,9 @@ version = "0.4.17"
 
 [[deps.MPICH_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "Hwloc_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"]
-git-tree-sha1 = "7715e65c47ba3941c502bffb7f266a41a7f54423"
+git-tree-sha1 = "e7159031670cee777cc2840aef7a521c3603e36c"
 uuid = "7cb0a576-ebde-5e09-9194-50597f1243b4"
-version = "4.2.3+0"
+version = "4.3.0+0"
 
 [[deps.MPIPreferences]]
 deps = ["Libdl", "Preferences"]
@@ -1429,10 +1430,10 @@ uuid = "5da4648a-3479-48b8-97b9-01cb529c0a1f"
 version = "0.3.5"
 
 [[deps.NVTX_jll]]
-deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
-git-tree-sha1 = "ce3269ed42816bf18d500c9f63418d4b0d9f5a3b"
+deps = ["Artifacts", "JLLWrappers", "Libdl"]
+git-tree-sha1 = "2c7b791c1eba364e4a70aabdea4ddc1f5ca53911"
 uuid = "e98f9f5b-d649-5603-91fd-7774390e6439"
-version = "3.1.0+2"
+version = "3.1.1+0"
 
 [[deps.NaNMath]]
 deps = ["OpenLibm_jll"]
@@ -1494,9 +1495,9 @@ version = "0.8.1+2"
 
 [[deps.OpenMPI_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "Hwloc_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML", "Zlib_jll"]
-git-tree-sha1 = "2dace87e14256edb1dd0724ab7ba831c779b96bd"
+git-tree-sha1 = "6c1cf6181ffe0aa33eb33250ca2a60e54a15ea66"
 uuid = "fe0851c0-eecd-5654-98d4-656369965a5c"
-version = "5.0.6+0"
+version = "5.0.7+0"
 
 [[deps.OpenSSL_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
@@ -1759,10 +1760,10 @@ uuid = "f50d1b31-88e8-58de-be2c-1cc44531875f"
 version = "0.5.1+0"
 
 [[deps.RootSolvers]]
-deps = ["ForwardDiff"]
-git-tree-sha1 = "a87fd671f7a298de98f2f3c5a9cd9890714eb9dd"
+deps = ["ForwardDiff", "Printf"]
+git-tree-sha1 = "c30edf81d7c22e90a5f9f5489eded5984e4ddcf0"
 uuid = "7181ea78-2dcb-4de3-ab41-2b8ab5a31e74"
-version = "0.4.2"
+version = "0.4.3"
 
 [[deps.RoundingEmulator]]
 git-tree-sha1 = "40b9edad2e5287e05bd413a38f61a8ff55b9557b"
@@ -1792,9 +1793,9 @@ version = "0.1.0"
 
 [[deps.SciMLBase]]
 deps = ["ADTypes", "Accessors", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "Expronicon", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"]
-git-tree-sha1 = "2e4b08a9adf6aba7c3239f56c7443096eff8f361"
+git-tree-sha1 = "ffed2507209da5b42c6881944ef41a340ab5449b"
 uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
-version = "2.74.0"
+version = "2.74.1"
 
     [deps.SciMLBase.extensions]
     SciMLBaseChainRulesCoreExt = "ChainRulesCore"
@@ -2125,9 +2126,15 @@ version = "0.11.3"
 
 [[deps.TimerOutputs]]
 deps = ["ExprTools", "Printf"]
-git-tree-sha1 = "d7298ebdfa1654583468a487e8e83fae9d72dac3"
+git-tree-sha1 = "3832505b94c1868baea47764127e6d36b5c9f29e"
 uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f"
-version = "0.5.26"
+version = "0.5.27"
+
+    [deps.TimerOutputs.extensions]
+    FlameGraphsExt = "FlameGraphs"
+
+    [deps.TimerOutputs.weakdeps]
+    FlameGraphs = "08572546-2f56-4bcf-ba4e-bab62c3a3f89"
 
 [[deps.TranscodingStreams]]
 git-tree-sha1 = "0c45878dcfdcfa8480052b6ab162cdd138781742"
@@ -2354,9 +2361,9 @@ version = "1.59.0+0"
 
 [[deps.oneTBB_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "7d0ea0f4895ef2f5cb83645fa689e52cb55cf493"
+git-tree-sha1 = "d5a767a3bb77135a99e433afe0eb14cd7f6914c3"
 uuid = "1317d2d5-d96f-522e-a858-c73665f53c3e"
-version = "2021.12.0+0"
+version = "2022.0.0+0"
 
 [[deps.p7zip_jll]]
 deps = ["Artifacts", "Libdl"]