Change default plots to png (#1318)

Author: kmdeck

.buildkite/Manifest-v1.11.toml

@@ -2,7 +2,7 @@
 
 julia_version = "1.11.6"
 manifest_format = "2.0"
-project_hash = "89ec8ab53baa760f6871af1f2b44a50375dfff04"
+project_hash = "0257c8e4fc6fd73b316df90fb308c7d86009613a"
 
 [[deps.ADTypes]]
 git-tree-sha1 = "7927b9af540ee964cc5d1b73293f1eb0b761a3a1"
@@ -481,11 +481,11 @@ deps = ["ClimaComms", "ClimaCore", "ClimaDiagnostics", "ClimaParams", "ClimaTime
 path = ".."
 uuid = "08f4d4ce-cf43-44bb-ad95-9d2d5f413532"
 version = "0.18.0"
-weakdeps = ["BSON", "CSV", "CairoMakie", "ClimaAnalysis", "DataFrames", "DelimitedFiles", "Flux", "GeoMakie", "HTTP", "Poppler_jll", "Printf", "StatsBase"]
+weakdeps = ["BSON", "CSV", "CairoMakie", "ClimaAnalysis", "DataFrames", "DelimitedFiles", "Flux", "GeoMakie", "HTTP", "Printf", "StatsBase"]
 
     [deps.ClimaLand.extensions]
     FluxnetSimulationsExt = ["DelimitedFiles"]
-    LandSimulationVisualizationExt = ["CairoMakie", "ClimaAnalysis", "GeoMakie", "Poppler_jll", "Printf", "StatsBase"]
+    LandSimulationVisualizationExt = ["CairoMakie", "ClimaAnalysis", "GeoMakie", "Printf", "StatsBase"]
     NeuralSnowExt = ["CSV", "DataFrames", "HTTP", "Flux", "StatsBase", "BSON"]
 
 [[deps.ClimaParams]]
@@ -506,9 +506,9 @@ weakdeps = ["BenchmarkTools", "CUDA", "OrderedCollections", "PrettyTables", "Sta
 
 [[deps.ClimaUtilities]]
 deps = ["Artifacts", "ClimaComms", "Dates"]
-git-tree-sha1 = "4402148693a5096c28cb09e544ce92b049b33e41"
+git-tree-sha1 = "fe1a7b3143f11c017118d3c99f067a09cb622f81"
 uuid = "b3f4f4ca-9299-4f7f-bd9b-81e1242a7513"
-version = "0.1.25"
+version = "0.1.26"
 
     [deps.ClimaUtilities.extensions]
     ClimaUtilitiesClimaCoreExt = "ClimaCore"
@@ -1842,12 +1842,6 @@ version = "2.10.0"
     LDLFactorizations = "40e66cde-538c-5869-a4ad-c39174c6795b"
     Metal = "dde4c033-4e86-420c-a63e-0dd931031962"
 
-[[deps.LittleCMS_jll]]
-deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll"]
-git-tree-sha1 = "fa7fd067dca76cadd880f1ca937b4f387975a9f5"
-uuid = "d3a379c0-f9a3-5b72-a4c0-6bf4d2e8af0f"
-version = "2.16.0+0"
-
 [[deps.LogExpFunctions]]
 deps = ["DocStringExtensions", "IrrationalConstants", "LinearAlgebra"]
 git-tree-sha1 = "13ca9e2586b89836fd20cccf56e57e2b9ae7f38f"
@@ -2253,12 +2247,6 @@ git-tree-sha1 = "8292dd5c8a38257111ada2174000a33745b06d4e"
 uuid = "18a262bb-aa17-5467-a713-aee519bc75cb"
 version = "3.2.4+0"
 
-[[deps.OpenJpeg_jll]]
-deps = ["Artifacts", "JLLWrappers", "Libdl", "Libtiff_jll", "LittleCMS_jll", "libpng_jll"]
-git-tree-sha1 = "7dc7028a10d1408e9103c0a77da19fdedce4de6c"
-uuid = "643b3616-a352-519d-856d-80112ee9badc"
-version = "2.5.4+0"
-
 [[deps.OpenLibm_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "05823500-19ac-5b8b-9628-191a04bc5112"
@@ -2434,12 +2422,6 @@ git-tree-sha1 = "36d8b4b899628fb92c2749eb488d884a926614d3"
 uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720"
 version = "1.4.3"
 
-[[deps.Poppler_jll]]
-deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "JpegTurbo_jll", "LibCURL_jll", "Libdl", "Libtiff_jll", "OpenJpeg_jll", "libpng_jll"]
-git-tree-sha1 = "7dbfb7f61c3aa5def7b7dad3fa344c1c2858a83b"
-uuid = "9c32591e-4766-534b-9725-b71a8799265b"
-version = "24.6.0+0"
-
 [[deps.PositiveFactorizations]]
 deps = ["LinearAlgebra"]
 git-tree-sha1 = "17275485f373e6673f7e7f97051f703ed5b15b20"

.buildkite/Manifest.toml

@@ -1,8 +1,8 @@
 # This file is machine-generated - editing it directly is not advised
 
-julia_version = "1.10.9"
+julia_version = "1.10.10"
 manifest_format = "2.0"
-project_hash = "c0c623423216c4720e43479fbb8a17c240dc8148"
+project_hash = "f103feec377f489085b518c9dea02dfb5ba7aa3a"
 
 [[deps.ADTypes]]
 git-tree-sha1 = "7927b9af540ee964cc5d1b73293f1eb0b761a3a1"
@@ -478,11 +478,11 @@ deps = ["ClimaComms", "ClimaCore", "ClimaDiagnostics", "ClimaParams", "ClimaTime
 path = ".."
 uuid = "08f4d4ce-cf43-44bb-ad95-9d2d5f413532"
 version = "0.18.0"
-weakdeps = ["BSON", "CSV", "CairoMakie", "ClimaAnalysis", "DataFrames", "DelimitedFiles", "Flux", "GeoMakie", "HTTP", "Poppler_jll", "Printf", "StatsBase"]
+weakdeps = ["BSON", "CSV", "CairoMakie", "ClimaAnalysis", "DataFrames", "DelimitedFiles", "Flux", "GeoMakie", "HTTP", "Printf", "StatsBase"]
 
     [deps.ClimaLand.extensions]
     FluxnetSimulationsExt = ["DelimitedFiles"]
-    LandSimulationVisualizationExt = ["CairoMakie", "ClimaAnalysis", "GeoMakie", "Poppler_jll", "Printf", "StatsBase"]
+    LandSimulationVisualizationExt = ["CairoMakie", "ClimaAnalysis", "GeoMakie", "Printf", "StatsBase"]
     NeuralSnowExt = ["CSV", "DataFrames", "HTTP", "Flux", "StatsBase", "BSON"]
 
 [[deps.ClimaParams]]
@@ -503,9 +503,9 @@ weakdeps = ["BenchmarkTools", "CUDA", "OrderedCollections", "PrettyTables", "Sta
 
 [[deps.ClimaUtilities]]
 deps = ["Artifacts", "ClimaComms", "Dates"]
-git-tree-sha1 = "4402148693a5096c28cb09e544ce92b049b33e41"
+git-tree-sha1 = "fe1a7b3143f11c017118d3c99f067a09cb622f81"
 uuid = "b3f4f4ca-9299-4f7f-bd9b-81e1242a7513"
-version = "0.1.25"
+version = "0.1.26"
 
     [deps.ClimaUtilities.extensions]
     ClimaUtilitiesClimaCoreExt = "ClimaCore"
@@ -1830,12 +1830,6 @@ version = "2.10.0"
     LDLFactorizations = "40e66cde-538c-5869-a4ad-c39174c6795b"
     Metal = "dde4c033-4e86-420c-a63e-0dd931031962"
 
-[[deps.LittleCMS_jll]]
-deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll"]
-git-tree-sha1 = "fa7fd067dca76cadd880f1ca937b4f387975a9f5"
-uuid = "d3a379c0-f9a3-5b72-a4c0-6bf4d2e8af0f"
-version = "2.16.0+0"
-
 [[deps.LogExpFunctions]]
 deps = ["DocStringExtensions", "IrrationalConstants", "LinearAlgebra"]
 git-tree-sha1 = "13ca9e2586b89836fd20cccf56e57e2b9ae7f38f"
@@ -2238,16 +2232,10 @@ git-tree-sha1 = "8292dd5c8a38257111ada2174000a33745b06d4e"
 uuid = "18a262bb-aa17-5467-a713-aee519bc75cb"
 version = "3.2.4+0"
 
-[[deps.OpenJpeg_jll]]
-deps = ["Artifacts", "JLLWrappers", "Libdl", "Libtiff_jll", "LittleCMS_jll", "libpng_jll"]
-git-tree-sha1 = "7dc7028a10d1408e9103c0a77da19fdedce4de6c"
-uuid = "643b3616-a352-519d-856d-80112ee9badc"
-version = "2.5.4+0"
-
 [[deps.OpenLibm_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "05823500-19ac-5b8b-9628-191a04bc5112"
-version = "0.8.1+4"
+version = "0.8.5+0"
 
 [[deps.OpenMPI_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "Hwloc_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML", "Zlib_jll"]
@@ -2415,12 +2403,6 @@ git-tree-sha1 = "36d8b4b899628fb92c2749eb488d884a926614d3"
 uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720"
 version = "1.4.3"
 
-[[deps.Poppler_jll]]
-deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "JpegTurbo_jll", "LibCURL_jll", "Libdl", "Libtiff_jll", "OpenJpeg_jll", "libpng_jll"]
-git-tree-sha1 = "7dbfb7f61c3aa5def7b7dad3fa344c1c2858a83b"
-uuid = "9c32591e-4766-534b-9725-b71a8799265b"
-version = "24.6.0+0"
-
 [[deps.PositiveFactorizations]]
 deps = ["LinearAlgebra"]
 git-tree-sha1 = "17275485f373e6673f7e7f97051f703ed5b15b20"

.buildkite/Project.toml

@@ -32,7 +32,6 @@ LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
 MPI = "da04e1cc-30fd-572f-bb4f-1f8673147195"
 NCDatasets = "85f8d34a-cbdd-5861-8df4-14fed0d494ab"
 NLsolve = "2774e3e8-f4cf-5e23-947b-6d7e65073b56"
-Poppler_jll = "9c32591e-4766-534b-9725-b71a8799265b"
 Printf = "de0858da-6303-5e67-8744-51eddeeeb8d7"
 ProfileCanvas = "efd6af41-a80b-495e-886c-e51b0c7d77a3"
 RootSolvers = "7181ea78-2dcb-4de3-ab41-2b8ab5a31e74"

.buildkite/longruns_gpu/pipeline.yml

@@ -46,7 +46,6 @@ steps:
           - julia --color=yes --project=.buildkite experiments/long_runs/snowy_land.jl
         artifact_paths:
           - "snowy_land_longrun_gpu/*png"
-          - "snowy_land_longrun_gpu/*pdf"
         agents:
           slurm_gpus: 1
           slurm_time: 3:00:00
@@ -58,7 +57,6 @@ steps:
           - julia --color=yes --project=.buildkite experiments/long_runs/low_res_snowy_land.jl
         artifact_paths:
           - "lowres_snowy_land_longrun_gpu/*png"
-          - "lowres_snowy_land_longrun_gpu/*pdf"
         agents:
           slurm_gpus: 1
           slurm_time: 3:00:00
@@ -68,7 +66,7 @@ steps:
       - label: ":sunglasses: California regional simulation"
         command:
           - julia --color=yes --project=.buildkite experiments/long_runs/land_region.jl
-        artifact_paths: "california_longrun_gpu/*pdf"
+        artifact_paths: "california_longrun_gpu/*png"
         agents:
           slurm_gpus: 1
           slurm_time: 01:00:00
@@ -78,7 +76,7 @@ steps:
       - label: "Soil"
         command:
           - julia --color=yes --project=.buildkite experiments/long_runs/soil.jl
-        artifact_paths: "soil_longrun_gpu/*pdf"
+        artifact_paths: "soil_longrun_gpu/*png"
         agents:
           slurm_gpus: 1
           slurm_time: 3:00:00
@@ -88,7 +86,7 @@ steps:
       - label: "Global bucket simulation"
         command:
           - julia --color=yes --project=.buildkite experiments/long_runs/bucket.jl
-        artifact_paths: "bucket_longrun_gpu/*pdf"
+        artifact_paths: "bucket_longrun_gpu/*png"
         agents:
           slurm_gpus: 1
           slurm_time: 00:30:00
@@ -103,7 +101,6 @@ steps:
           - julia --color=yes --project=.buildkite experiments/long_runs/snowy_land.jl
         artifact_paths:
           - "snowy_land_longrun_gpu/*png"
-          - "snowy_land_longrun_gpu/*pdf"
         agents:
           slurm_gpus: 1
           slurm_time: 15:00:00
@@ -114,7 +111,7 @@ steps:
       - label: "Soil, 20 years"
         command:
           - julia --color=yes --project=.buildkite experiments/long_runs/soil.jl
-        artifact_paths: "soil_longrun_gpu/*pdf"
+        artifact_paths: "soil_longrun_gpu/*png"
         agents:
           slurm_gpus: 1
           slurm_time: 15:00:00

.buildkite/pipeline.yml

@@ -1,6 +1,6 @@
 agents:
   queue: new-central
-  slurm_mem: 12G
+  slurm_mem: 24G
   modules: climacommon/2025_03_18
 
 env:

Project.toml

@@ -33,13 +33,12 @@ DelimitedFiles = "8bb1440f-4735-579b-a4ab-409b98df4dab"
 Flux = "587475ba-b771-5e3f-ad9e-33799f191a9c"
 GeoMakie = "db073c08-6b98-4ee5-b6a4-5efafb3259c6"
 HTTP = "cd3eb016-35fb-5094-929b-558a96fad6f3"
-Poppler_jll = "9c32591e-4766-534b-9725-b71a8799265b"
 Printf = "de0858da-6303-5e67-8744-51eddeeeb8d7"
 StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
 
 [extensions]
 FluxnetSimulationsExt = ["DelimitedFiles"]
-LandSimulationVisualizationExt = ["CairoMakie", "ClimaAnalysis", "GeoMakie", "Poppler_jll", "Printf", "StatsBase"]
+LandSimulationVisualizationExt = ["CairoMakie", "ClimaAnalysis", "GeoMakie", "Printf", "StatsBase"]
 NeuralSnowExt = ["CSV", "DataFrames", "HTTP", "Flux", "StatsBase", "BSON"]
 
 [compat]
@@ -66,7 +65,6 @@ LazyArtifacts = "1"
 LazyBroadcast = "1.0.0"
 LinearAlgebra = "1"
 NCDatasets = "0.14"
-Poppler_jll = "24"
 Printf = "1"
 SciMLBase = "2.53"
 StaticArrays = "1.6"

docs/Manifest-v1.11.toml

@@ -2,7 +2,7 @@
 
 julia_version = "1.11.6"
 manifest_format = "2.0"
-project_hash = "dc918b2fbc2f4c5c8339bef498fec07d53107151"
+project_hash = "ac2b3037e733f570fdf66ccd6a7a2216cb467ff9"
 
 [[deps.ADTypes]]
 git-tree-sha1 = "60665b326b75db6517939d0e1875850bc4a54368"
@@ -421,11 +421,11 @@ deps = ["ClimaComms", "ClimaCore", "ClimaDiagnostics", "ClimaParams", "ClimaTime
 path = ".."
 uuid = "08f4d4ce-cf43-44bb-ad95-9d2d5f413532"
 version = "0.18.0"
-weakdeps = ["BSON", "CSV", "CairoMakie", "ClimaAnalysis", "DataFrames", "DelimitedFiles", "Flux", "GeoMakie", "HTTP", "Poppler_jll", "Printf", "StatsBase"]
+weakdeps = ["BSON", "CSV", "CairoMakie", "ClimaAnalysis", "DataFrames", "DelimitedFiles", "Flux", "GeoMakie", "HTTP", "Printf", "StatsBase"]
 
     [deps.ClimaLand.extensions]
     FluxnetSimulationsExt = ["DelimitedFiles"]
-    LandSimulationVisualizationExt = ["CairoMakie", "ClimaAnalysis", "GeoMakie", "Poppler_jll", "Printf", "StatsBase"]
+    LandSimulationVisualizationExt = ["CairoMakie", "ClimaAnalysis", "GeoMakie", "Printf", "StatsBase"]
     NeuralSnowExt = ["CSV", "DataFrames", "HTTP", "Flux", "StatsBase", "BSON"]
 
 [[deps.ClimaLandSimulations]]
@@ -458,9 +458,9 @@ version = "0.8.5"
 
 [[deps.ClimaUtilities]]
 deps = ["Artifacts", "ClimaComms", "Dates"]
-git-tree-sha1 = "4402148693a5096c28cb09e544ce92b049b33e41"
+git-tree-sha1 = "fe1a7b3143f11c017118d3c99f067a09cb622f81"
 uuid = "b3f4f4ca-9299-4f7f-bd9b-81e1242a7513"
-version = "0.1.25"
+version = "0.1.26"
 
     [deps.ClimaUtilities.extensions]
     ClimaUtilitiesClimaCoreExt = "ClimaCore"
@@ -1867,12 +1867,6 @@ git-tree-sha1 = "da046be6d63304f7ba9c1bb04820fb306ba1ab12"
 uuid = "98b081ad-f1c9-55d3-8b20-4c87d4299306"
 version = "2.20.1"
 
-[[deps.LittleCMS_jll]]
-deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll"]
-git-tree-sha1 = "fa7fd067dca76cadd880f1ca937b4f387975a9f5"
-uuid = "d3a379c0-f9a3-5b72-a4c0-6bf4d2e8af0f"
-version = "2.16.0+0"
-
 [[deps.LogExpFunctions]]
 deps = ["DocStringExtensions", "IrrationalConstants", "LinearAlgebra"]
 git-tree-sha1 = "13ca9e2586b89836fd20cccf56e57e2b9ae7f38f"
@@ -2290,12 +2284,6 @@ git-tree-sha1 = "8292dd5c8a38257111ada2174000a33745b06d4e"
 uuid = "18a262bb-aa17-5467-a713-aee519bc75cb"
 version = "3.2.4+0"
 
-[[deps.OpenJpeg_jll]]
-deps = ["Artifacts", "JLLWrappers", "Libdl", "Libtiff_jll", "LittleCMS_jll", "libpng_jll"]
-git-tree-sha1 = "7dc7028a10d1408e9103c0a77da19fdedce4de6c"
-uuid = "643b3616-a352-519d-856d-80112ee9badc"
-version = "2.5.4+0"
-
 [[deps.OpenLibm_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "05823500-19ac-5b8b-9628-191a04bc5112"
@@ -2503,12 +2491,6 @@ git-tree-sha1 = "36d8b4b899628fb92c2749eb488d884a926614d3"
 uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720"
 version = "1.4.3"
 
-[[deps.Poppler_jll]]
-deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "JpegTurbo_jll", "LibCURL_jll", "Libdl", "Libtiff_jll", "OpenJpeg_jll", "libpng_jll"]
-git-tree-sha1 = "7dbfb7f61c3aa5def7b7dad3fa344c1c2858a83b"
-uuid = "9c32591e-4766-534b-9725-b71a8799265b"
-version = "24.6.0+0"
-
 [[deps.PositiveFactorizations]]
 deps = ["LinearAlgebra"]
 git-tree-sha1 = "17275485f373e6673f7e7f97051f703ed5b15b20"