remove expacts from setup

Author: karlnyr

setup.py

@@ -14,20 +14,65 @@
     long_description=__doc__,
     url="https://github.com/Clinical-Genomics/microSALT",
     author="Isak Sylvin",
-    author_email='isak.sylvin@scilifelab.se',
+    author_email="isak.sylvin@scilifelab.se",
     install_requires=install_requires,
     packages=find_packages(),
     include_package_data=True,
     zip_safe=False,
-    data_files=[('expec', ['unique_references/ExPEC.fsa']),
-                ('logos', ['artwork/microsalt.jpg', 'artwork/swedac.jpg']),
-                ('testdata', ['tests/testdata/sampleinfo_samples.json','tests/testdata/sampleinfo_mlst.json','tests/testdata/sampleinfo_projects.json','tests/testdata/sampleinfo_reports.json','tests/testdata/sampleinfo_expec.json','tests/testdata/sampleinfo_resistance.json','tests/testdata/quast_results.tsv', 'tests/testdata/blast_single_resistance.txt','tests/testdata/blast_single_loci.txt','tests/testdata/alignment.stats.ref','tests/testdata/alignment.stats.raw','tests/testdata/alignment.stats.map','tests/testdata/alignment.stats.ins','tests/testdata/alignment.stats.dup','tests/testdata/alignment.stats.cov','configExample.json']),
-                ('tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A1/', ['tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A1/dummysequences_1.fastq.gz', 'tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A1/dummysequences_2.fastq.gz']),
-                ('tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A2/', ['tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A2/dummysequences_1.fastq.gz', 'tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A2/dummysequences_2.fastq.gz']),
-                ('tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A3/', ['tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A3/dummysequences_1.fastq.gz', 'tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A3/dummysequences_2.fastq.gz']),
-                ('tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A4/', ['tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A4/dummysequences_1.fastq.gz', 'tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A4/dummysequences_2.fastq.gz'])],
+    data_files=[
+        ("logos", ["artwork/microsalt.jpg", "artwork/swedac.jpg"]),
+        (
+            "testdata",
+            [
+                "tests/testdata/sampleinfo_samples.json",
+                "tests/testdata/sampleinfo_mlst.json",
+                "tests/testdata/sampleinfo_projects.json",
+                "tests/testdata/sampleinfo_reports.json",
+                "tests/testdata/sampleinfo_expec.json",
+                "tests/testdata/sampleinfo_resistance.json",
+                "tests/testdata/quast_results.tsv",
+                "tests/testdata/blast_single_resistance.txt",
+                "tests/testdata/blast_single_loci.txt",
+                "tests/testdata/alignment.stats.ref",
+                "tests/testdata/alignment.stats.raw",
+                "tests/testdata/alignment.stats.map",
+                "tests/testdata/alignment.stats.ins",
+                "tests/testdata/alignment.stats.dup",
+                "tests/testdata/alignment.stats.cov",
+                "configExample.json",
+            ],
+        ),
+        (
+            "tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A1/",
+            [
+                "tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A1/dummysequences_1.fastq.gz",
+                "tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A1/dummysequences_2.fastq.gz",
+            ],
+        ),
+        (
+            "tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A2/",
+            [
+                "tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A2/dummysequences_1.fastq.gz",
+                "tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A2/dummysequences_2.fastq.gz",
+            ],
+        ),
+        (
+            "tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A3/",
+            [
+                "tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A3/dummysequences_1.fastq.gz",
+                "tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A3/dummysequences_2.fastq.gz",
+            ],
+        ),
+        (
+            "tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A4/",
+            [
+                "tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A4/dummysequences_1.fastq.gz",
+                "tests/testdata/AAA1234_2000.1.2_3.4.5/AAA1234A4/dummysequences_2.fastq.gz",
+            ],
+        ),
+    ],
     entry_points={
-        'console_scripts': ['microSALT=microSALT.cli:root'],
+        "console_scripts": ["microSALT=microSALT.cli:root"],
     },
-    python_requires='>=3.10',
-)
+    python_requires=">=3.10",
+)