match condition for records with missing fields (GROBID)

Author: Gerit Wagner

bib_dedupe/match_conditions.py

@@ -82,6 +82,7 @@ def both_entrytypes(entrytype: str) -> str:
     f"({auXX_ti095_ct095} & {match(VOLUME, NUMBER, PAGES, YEAR)} & {non_contradicting(DOI, ABSTRACT)})",
     # no CONTAINER_TITLE
     f"({au10_ti10_ctNC} & {match(VOLUME, YEAR)} & {non_contradicting(NUMBER, PAGES, DOI, ABSTRACT)})",
+    f"({au10_ti10_ctNC} & {match(YEAR, DOI)} & {non_contradicting(VOLUME, NUMBER, PAGES, ABSTRACT)})", # GROBID
     f"({au09_ti09_ctXX} & {match(PAGES, DOI)} & {non_contradicting(VOLUME, NUMBER, ABSTRACT)} & {YEAR} > 0.9)",
     f"({au09_ti09_ctXX} & ({match(NUMBER)} & {non_contradicting(PAGES)} | {non_contradicting(NUMBER)} & {match(PAGES)}) & {non_contradicting(VOLUME, YEAR, DOI, ABSTRACT)})",
     f"({au09_ti09_ctXX} & {match(VOLUME, PAGES)})",

tests/data/merged_record_ids.csv

@@ -1,4 +1,5 @@
 merged_ids
 "id_0001432;id_0025776"
 "id_0022176;id_0021834"
-"id_0000728;id_0000728NEW"
+"id_0000728;id_0000728NEW"
+"SauerSeuring2023;SauerSeuring2023B"

tests/data/records_pre_merged.csv

@@ -14,3 +14,6 @@
 0957-9672","old_search"
 "id_0000728NEW","article","Adeli K.Lewis G. F.",2008,"Intestinal lipoprotein overproduction in insulin-resistant states","Curr Opin Lipidol",19,3,"221-8","PURPOSE OF REVIEW: Excessive postprandial lipemia is highly prevalent in obese and insulin-resistant/type 2 diabetic individuals and substantially increases the risk of atherosclerosis and cardiovascular disease. This article will review our current understanding of the link between insulin resistance and intestinal lipoprotein overproduction and highlight some of the key recent findings in the field. RECENT FINDINGS: Emerging evidence from several animal models of insulin resistance as well as insulin-resistant humans clearly supports the link between insulin resistance and aberrant intestinal lipoprotein metabolism. In insulin-resistant states elevated free fatty acid flux into the intestine downregulation of intestinal insulin signaling and upregulation of microsomal triglyceride transfer protein all appear to stimulate intestinal lipoprotein production. Gut peptides GLP-1 and GLP-2 may be important regulators of intestinal lipid absorption and lipoprotein production. SUMMARY: Available evidence in humans and animal models strongly favors the concept that the small intestine is not merely an absorptive organ but rather plays an active role in regulating the rate of production of triglyceride-rich lipoproteins. Metabolic signals in insulin resistance and type 2 diabetes and in some cases an aberrant intestinal response to these factors all contribute to the enhanced formation and secretion of triglyceride-rich lipoproteins.","10.1097/MOL.0b013e3282ffaf82","0957-9672 (Print)
 0957-9672","new_search"
+"SauerSeuring2023","misc","Sauer, Philipp C and Seuring, Stefan",2023,"How to conduct systematic literature reviews in management research: a guide in 6 steps and 14 decisions","","","","","","10.1007/S11846-023-00668-3","",""
+"SauerSeuring2023B","article","Sauer, Philipp C. and Seuring, Stefan",2023,"How to conduct systematic literature reviews in management research: a guide in 6 steps and 14 decisions","Review of Managerial Science","17","5","1899--1933","Systematic literature reviews (SLRs) have become a standard tool in many fields of management research but are often considerably less stringently presented than other pieces of research. The resulting lack of replicability of the research and conclusions has spurred a vital debate on the SLR process, but related guidance is scattered across a number of core references and is overly centered on the design and conduct of the SLR, while failing to guide researchers in crafting and presenting their findings in an impactful way. This paper offers an integrative review of the widely applied and most recent SLR guidelines in the management domain. The paper adopts a well-established six-step SLR process and refines it by sub-dividing the steps into 14 distinct decisions: (1) from the research question, via (2) characteristics of the primary studies, (3) to retrieving a sample of relevant literature, which is then (4) selected and (5) synthesized so that, finally (6), the results can be reported. Guided by these steps and decisions, prior SLR guidelines are critically reviewed, gaps are identified, and a synthesis is offered. This synthesis elaborates mainly on the gaps while pointing the reader toward the available guidelines. The paper thereby avoids reproducing existing guidance but critically enriches it. The 6 steps and 14 decisions provide methodological, theoretical, and practical guidelines along the SLR process, exemplifying them via best-practice examples and revealing their temporal sequence and main interrelations. The paper guides researchers in the process of designing, executing, and publishing a theory-based and impact-oriented SLR.","10.1007/S11846-023-00668-3","",""
+