Merge branch 'develop' of github.com:CodeForPhilly/chime into 407-prescribe-mitigation-date

Author: PhilMiller

k8s/app.yaml

@@ -25,7 +25,7 @@ spec:
         app: chime
     spec:
       containers:
-      - image: docker.pkg.github.com/codeforphilly/chime/penn-chime:1.1.1
+      - image: docker.pkg.github.com/codeforphilly/chime/penn-chime:1.1.2
         name: chime
         ports:
         - containerPort: 8000

setup.py

@@ -1,6 +1,6 @@
 """Setup file for chime
 """
-__version__ = "1.1.1"
+__version__ = "1.1.2"
 __author__ = "Predictive Healthcare @ Penn Medicine"
 
 from os import path

src/penn_chime/parameters.py

@@ -68,7 +68,7 @@ def __init__(
         recovered: int = 0,
         region: Optional[Regions] = None,
     ):
-        self.current_hospitalized = StrictlyPositive(value=current_hospitalized)
+        self.current_hospitalized = Positive(value=current_hospitalized)
 
         Rate(value=hospitalized.rate), Rate(value=icu.rate), Rate(value=ventilated.rate)
         StrictlyPositive(value=hospitalized.days), StrictlyPositive(value=icu.days),

src/penn_chime/presentation.py

@@ -59,9 +59,12 @@ def display_header(st, m, p):
     )
     st.markdown(
         """*This tool was developed by the [Predictive Healthcare team](http://predictivehealthcare.pennmedicine.org/) at
-    Penn Medicine to assist hospitals and public health officials with hospital capacity planning,
-    but can be used anywhere in the world.
-    Customize it for your region by modifying data inputs in the left panel.*
+    Penn Medicine to assist hospitals and public health officials with hospital capacity planning.*"""
+    )
+    st.markdown(
+        """**Notice**: *There is a high 
+    degree of uncertainty about the details of COVID-19 infection, transmission, and the effectiveness of social distancing 
+    measures. Long-term projections made using this simplified model of outbreak progression should be treated with extreme caution.*
     """
     )
 
@@ -284,7 +287,7 @@ def display_sidebar(st, d: Parameters) -> Parameters:
 
     # Build in desired order
     st.sidebar.markdown(
-        """**CHIME [v1.1.1](https://github.com/CodeForPhilly/chime/releases/tag/v1.1.1) ({change_date})**""".format(
+        """**CHIME [v1.1.2](https://github.com/CodeForPhilly/chime/releases/tag/v1.1.1) ({change_date})**""".format(
             change_date=CHANGE_DATE
         )
     )

src/penn_chime/validators/validators.py

@@ -47,7 +47,7 @@ def __init__(self) -> None:
         pass
 
     def validate(self, value):
-        if 0 >= value or value >= 1:
+        if 0 > value or value > 1:
             raise ValueError(f"{value} needs to be a rate (i.e. in [0,1]).")
 
 class Date(Validator):