CU-869a9q6rm: Include MetaCAT model cards in overall model card (#120)

* CU-869a9q6rm: Include MetaCAT model cards in overall model card

* CU-869a9q6rm: Ensure meta cat model cards are allowed as dicts

* CU-869a9q6rm: Make sure to overload MetaCAT model card method.

This is to be certain on the type of the output

Author: mart-r

medcat-v2/medcat/cat.py

@@ -812,13 +812,11 @@ def get_model_card(self, as_dict: bool = False) -> Union[str, ModelCard]:
         Returns:
             Union[str, ModelCard]: The model card.
         """
-        meta_cat_categories = [
-            cnf.general.category_name  # type: ignore
-            for cnf in self.config.components.addons
-            if cnf.comp_name == 'meta_cat' and
-            # NOTE: not the best way to check this,
-            #       but I don't want to import the addon config
-            type(cnf).__name__ == 'ConfigMetaCAT']
+        from medcat.components.addons.meta_cat import MetaCATAddon
+        met_cat_model_cards = [
+            mc.mc.get_model_card(True) for mc in
+            self.get_addons_of_type(MetaCATAddon)
+        ]
         cdb_info = self.cdb.get_basic_info()
         model_card: ModelCard = {
             'Model ID': self.config.meta.hash,
@@ -827,7 +825,7 @@ def get_model_card(self, as_dict: bool = False) -> Union[str, ModelCard]:
             'Description': self.config.meta.description,
             'Source Ontology': self.config.meta.ontology,
             'Location': self.config.meta.location,
-            'MetaCAT models': meta_cat_categories,
+            'MetaCAT models': met_cat_model_cards,
             'Basic CDB Stats': cdb_info,
             'Performance': {},  # TODO
             'Important Parameters (Partial view, '

medcat-v2/medcat/components/addons/meta_cat/meta_cat.py

@@ -5,6 +5,7 @@
 from multiprocessing import Lock
 from datetime import datetime
 from typing import Iterable, Optional, cast, Union, Any, TypedDict, Callable
+from typing import overload, Literal
 
 from medcat.utils.hasher import Hasher
 
@@ -861,6 +862,14 @@ def __call__(self, doc: MutableDocument) -> MutableDocument:
         self._set_meta_anns(doc, id2category_value)
         return doc
 
+    @overload
+    def get_model_card(self, as_dict: Literal[True]) -> dict:
+        pass
+
+    @overload
+    def get_model_card(self, as_dict: Literal[False]) -> str:
+        pass
+
     def get_model_card(self, as_dict: bool = False) -> Union[str, dict]:
         """A minimal model card.
 

medcat-v2/medcat/data/model_card.py

@@ -23,7 +23,7 @@
         'Description': str,
         'Source Ontology': list[str],
         'Location': str,
-        'MetaCAT models': list[str],
+        'MetaCAT models': list[dict],
         'Basic CDB Stats': CDBInfo,
         'Performance': dict[str, Any],
         ('Important Parameters '