Fix URLs from http to https for CRAN resubmission

Author: civilstat

CRAN-SUBMISSION

@@ -1,3 +1,3 @@
-Version: 0.2.1
-Date: 2022-04-25 20:06:10 UTC
-SHA: 62b7f93e73a16b2de430d4482961bc77a85c5954
+Version: 0.2.2
+Date: 2022-06-21 03:44:32 UTC
+SHA: 4fa5bec60be02f73eb380c2e29ed0f927108dc70

DESCRIPTION

@@ -1,8 +1,8 @@
 Package: CIPerm
 Type: Package
 Title: Computationally-Efficient Confidence Intervals for Mean Shift from Permutation Methods
-Version: 0.2.2
-Date: 2022-06-20
+Version: 0.2.3
+Date: 2022-06-21
 Authors@R: c(
     person("Emily", "Tupaj", role = "aut"),
     person("Jerzy", "Wieczorek", email = "jawieczo@colby.edu", role = c("cre", "aut"),

NEWS.md

@@ -1,3 +1,7 @@
+# CIPerm 0.2.3
+
+* Fix typo in URLs.
+
 # CIPerm 0.2.2
 
 * Update Nguyen (2009) links from URLs to DOIs.

README.md

@@ -8,7 +8,7 @@
 This R package implements computationally-efficient construction of confidence intervals from permutation tests or randomization tests for simple differences in means. In other words, if we set up a permutation or randomization test to evaluate $H_0: \mu_A - \mu_B = 0$,
 then how can we use that same single set of permutations to cheaply construct a CI for the $(\mu_A - \mu_B)$ parameter?
 
-The method is based on Minh D. Nguyen's 2009 MS thesis paper, "Nonparametric Inference using Randomization and Permutation Reference Distribution and their Monte-Carlo Approximation," http://doi.org/10.15760/etd.7798.
+The method is based on Minh D. Nguyen's 2009 MS thesis paper, "Nonparametric Inference using Randomization and Permutation Reference Distribution and their Monte-Carlo Approximation," https://doi.org/10.15760/etd.7798.
 See the `nguyen` vignette for a brief summary of the method and for our replication of Nguyen's results.
 
 Note that our R function arguments and outputs are structured differently than the similarly-named R functions in Nguyen (2009), but the results are equivalent.
@@ -71,7 +71,7 @@ Nguyen, M.D. (2009).
 Reference Distribution and their Monte-Carlo Approximation"
 [unpublished MS thesis; Mara Tableman, advisor], Portland State University.
 *Dissertations and Theses*. Paper 5927.
-[DOI:10.15760/etd.7798](http://doi.org/10.15760/etd.7798).
+[DOI:10.15760/etd.7798](https://doi.org/10.15760/etd.7798).
 
 Tupaj, E. and Wieczorek, J. (2022).
 "`CIPerm`: An R Package for Computationally Efficient Confidence Intervals from Permutation Test,"

cran-comments.md

@@ -1,3 +1,10 @@
+## Resubmission
+
+This is a resubmission. In this version I have:
+
+* Changed URLs from http to https so that they no longer redirect
+
+
 ## Test environments
 
 * local Windows 10 install, R 4.2.0
@@ -9,8 +16,22 @@
 
 ## R CMD check results
 
-There were no ERRORs or WARNINGs or NOTEs.
+There were no ERRORs or WARNINGs.
+
+There was one NOTE:
+
+Found the following (possibly) invalid URLs:
+  URL: https://doi.org/10.1214/088342304000000396
+    From: inst/doc/nguyen.html
+          README.md
+    Status: 500
+    Message: Internal Server Error
+  URL: https://doi.org/10.2307/2532852
+    From: inst/doc/nguyen.html
+    Status: 403
+    Message: Forbidden
 
+These are valid URLs.
 
 ## Downstream dependencies
 

vignettes/nguyen.Rmd

@@ -21,7 +21,7 @@ We show that our package replicates the analyses in:
 Reference Distribution and their Monte-Carlo Approximation"
 [unpublished MS thesis; Mara Tableman, advisor], Portland State University.
 *Dissertations and Theses*. Paper 5927.
-[DOI:10.15760/etd.7798](http://doi.org/10.15760/etd.7798).
+[DOI:10.15760/etd.7798](https://doi.org/10.15760/etd.7798).
 
 Note that our R function arguments and outputs are structured differently than the similarly-named R functions in Nguyen (2009), but the results are equivalent.