Added "file:///" to the "location" attribute of "sourceFile" element when converting to .mzml format to avoid problems identifying URI format when using relative path.

CarlosHorro · CarlosHorro · commit 3fd792558cdc · 2020-04-29T12:50:42.000+02:00
diff --git a/Writer/MzMlSpectrumWriter.cs b/Writer/MzMlSpectrumWriter.cs
@@ -162,7 +162,7 @@ public override void Write(IRawDataPlus rawFile, int firstScanNumber, int lastSc
                 _writer.WriteStartElement("sourceFile");
                 _writer.WriteAttributeString("id", SourceFileId);
                 _writer.WriteAttributeString("name", ParseInput.RawFileNameWithoutExtension);
-                _writer.WriteAttributeString("location", ParseInput.RawFilePath);
+                _writer.WriteAttributeString("location", "file:///"+ParseInput.RawFilePath);
                 SerializeCvParam(new CVParamType
                 {
                     accession = "MS:1000768",

Original file line number	Diff line number	Diff line change
`@@ -162,7 +162,7 @@ public override void Write(IRawDataPlus rawFile, int firstScanNumber, int lastSc`
`162`	`162`	`_writer.WriteStartElement("sourceFile");`
`163`	`163`	`_writer.WriteAttributeString("id", SourceFileId);`
`164`	`164`	`_writer.WriteAttributeString("name", ParseInput.RawFileNameWithoutExtension);`
`165`		`- _writer.WriteAttributeString("location", ParseInput.RawFilePath);`
	`165`	`+ _writer.WriteAttributeString("location", "file:///"+ParseInput.RawFilePath);`
`166`	`166`	`SerializeCvParam(new CVParamType`
`167`	`167`	`{`
`168`	`168`	`accession = "MS:1000768",`