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pages/meta-proteome-analyzer/meta-proteome-analyzer.md

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## News ##
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*MPA Portable version 1.9.0 (June 2019)* has been released with the following updates:
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*MPA Portable version 2.0.0 (December 2019) has been released with the following features:
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* MPA now has full Maven support
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* UniProt JAPI was updated to the latest version 1.0.26 (fixing errors occurring during the retrieval of UniProt meta-information)
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* Minor bugfixes were performed
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* The graphical user interface now supports a direct connection to the Unipept web interface (https://unipept.ugent.be/): identified peptides are directly mapped to the Unipept service (using the MPA Export menu --> Export peptides to Unipept).
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* UniProt JAPI was updated to the version 1.0.28
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*MPA Portable version 1.8.1 (October 2018)* has been released with the following update:
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*MPA Portable version 1.9.0 (June 2019)* has been released with the following updates:
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* UniProt JAPI was updated to the latest version 1.0.16 (fixing errors occurring during the retrieval of UniProt meta-information)
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* MPA now has full Maven support
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* UniProt JAPI was updated to the latest version 1.0.26 (fixing errors occurring during the retrieval of UniProt meta-information)
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* Minor bugfixes were performed
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*MPA Portable version 1.6.0* has been released with the following new features:
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* Added new import function for mzIdentML files: this feature supports the re-analysis of result identification data stored in mzIdentML format.
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* Added new Import menu which contains the import function for "MPA Experiment" (see Release version 1.5.0).
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* Added the feature to import MPA experiment files without requiring the corresponding MGF files.
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* Added the indexing of peptide sequences for FASTA databases: this feature allows to retrieve all protein identifications contained in the reference proteomes (and more than the default hits suggested by the search engines).
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*MPA Portable version 1.5.0* has been released with the following updates:
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* Added "Import MPA Experiment" feature: saved experiment files (*.mpa) can now be loaded into into a project
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* Updated "Export MPA Experiment" feature: experiment files (*.mpa) are stored together with the original MS/MS spectra
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* Added "Update UniProt Entries" feature (see MetaProteomeAnalyzerCLI for details)
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* Various bugfixes and GUI improvements
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## Downloads ##
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[[Download software]](https://github.com/compomics/meta-proteome-analyzer/releases/download/v1.9.0/mpa-portable-1.9.0.zip) *MPA Portable version 1.9.0 - Windows and Linux 32-bit/64-bit - released on June 12, 2019*
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[[Download software]](https://github.com/compomics/meta-proteome-analyzer/releases/download/v2.0.0/mpa-portable-2.0.0.zip) *MPA Portable version 2.0 - Windows and Linux 32-bit/64-bit - released on December 18, 2019*
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[[Download example data set]](https://github.com/compomics/meta-proteome-analyzer/raw/master/test/de/mpa/resources/Ebendorf1.zip) *Microbial community sample data set (from Ebendorf biogas plant)*
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* **Operating system**: (Tested on Windows XP, Windows Vista, Windows 7/8/10 and various Linux systems)
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* **Memory**: The more memory, the better! (preferably 4 GB at least, but highly recommended are 8 or 16 GB of RAM)
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Please [download](https://github.com/compomics/meta-proteome-analyzer/releases/download/v1.8.1/mpa-portable-1.8.1.zip) the latest version of `mpa-portable-X.Y.Z.zip` (where X, Y and Z represent the current version of the software).
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Please [download](https://github.com/compomics/meta-proteome-analyzer/releases/download/v2.0.0/mpa-portable-2.0.0.zip) the latest version of `mpa-portable-X.Y.Z.zip` (where X, Y and Z represent the current version of the software).
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Before starting the MPA Portable version, please make sure that you have Java 1.8 installed. To check the currently installed java version, open a console/bash window and type:
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