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lines changed Original file line number Diff line number Diff line change @@ -5,6 +5,24 @@ All notable changes to this project will be documented in this file.
55The format is based on [ Keep a Changelog] ( https://keepachangelog.com/en/1.0.0/ ) ,
66and this project adheres to [ Semantic Versioning] ( https://semver.org/spec/v2.0.0.html ) .
77
8+ ## [ 0.7.4] - 2024-03-18
9+
10+ ### Added
11+
12+ - ` Peptidoform ` : Support adding and applying global terminal modifications. For now using a
13+ workaround while waiting for official support and an implementation in Pyteomics. See
14+ HUPO-PSI/ProForma #6 .
15+
16+ ## [ 0.7.3] - 2024-03-04
17+
18+ ### Changed
19+
20+ - ` io.xtandem ` : Parse double mass modifications as double modification instead of merging and
21+ summing mass shifts into a single modification.
22+ - ` io.xtandem ` : Avoid float formatting issues when parsing modification mass label.
23+ - ` io.xtandem ` : Parse all proteins into ` protein_list ` instead of only the first one.
24+ - ` io.tsv ` : Log error instead of raising exception when a TSV row cannot be parsed.
25+
826## [ 0.7.2] - 2023-11-29
927
1028### Fixed
Original file line number Diff line number Diff line change 11"""Common utilities for parsing and handling PSMs, and search engine results."""
22
3- __version__ = "0.7.3 "
3+ __version__ = "0.7.4 "
44
55from warnings import filterwarnings
66
1212 module = "psims.mzmlb" ,
1313)
1414
15- from psm_utils .peptidoform import Peptidoform
16- from psm_utils .psm import PSM
17- from psm_utils .psm_list import PSMList
15+ from psm_utils .peptidoform import Peptidoform # noqa: E402, F401
16+ from psm_utils .psm import PSM # noqa: E402, F401
17+ from psm_utils .psm_list import PSMList # noqa: E402, F401
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