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DatasetServiceImpl.kt
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1070 lines (963 loc) · 40.3 KB
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// Copyright (c) Cosmo Tech.
// Licensed under the MIT license.
package com.cosmotech.dataset.service
import com.cosmotech.common.CsmPhoenixService
import com.cosmotech.common.config.DATASET_INPUTS_SCHEMA
import com.cosmotech.common.events.GetRunnerAttachedToDataset
import com.cosmotech.common.events.RunnerDeleted
import com.cosmotech.common.exceptions.CsmResourceNotFoundException
import com.cosmotech.common.id.generateId
import com.cosmotech.common.rbac.CsmRbac
import com.cosmotech.common.rbac.PERMISSION_CREATE_CHILDREN
import com.cosmotech.common.rbac.PERMISSION_DELETE
import com.cosmotech.common.rbac.PERMISSION_READ
import com.cosmotech.common.rbac.PERMISSION_READ_SECURITY
import com.cosmotech.common.rbac.PERMISSION_WRITE
import com.cosmotech.common.rbac.PERMISSION_WRITE_SECURITY
import com.cosmotech.common.rbac.ROLE_NONE
import com.cosmotech.common.rbac.getCommonRolesDefinition
import com.cosmotech.common.rbac.model.RbacAccessControl
import com.cosmotech.common.rbac.model.RbacSecurity
import com.cosmotech.common.utils.ResourceScanner
import com.cosmotech.common.utils.constructPageRequest
import com.cosmotech.common.utils.findAllPaginated
import com.cosmotech.common.utils.getCurrentAccountIdentifier
import com.cosmotech.common.utils.sanitizeDatasetPartId
import com.cosmotech.dataset.DatasetApiServiceInterface
import com.cosmotech.dataset.domain.Dataset
import com.cosmotech.dataset.domain.DatasetAccessControl
import com.cosmotech.dataset.domain.DatasetCreateRequest
import com.cosmotech.dataset.domain.DatasetEditInfo
import com.cosmotech.dataset.domain.DatasetPart
import com.cosmotech.dataset.domain.DatasetPartCreateRequest
import com.cosmotech.dataset.domain.DatasetPartTypeEnum
import com.cosmotech.dataset.domain.DatasetPartUpdateRequest
import com.cosmotech.dataset.domain.DatasetRole
import com.cosmotech.dataset.domain.DatasetSecurity
import com.cosmotech.dataset.domain.DatasetUpdateRequest
import com.cosmotech.dataset.part.factories.DatasetPartManagementFactory
import com.cosmotech.dataset.repositories.DatasetPartRepository
import com.cosmotech.dataset.repositories.DatasetRepository
import com.cosmotech.workspace.WorkspaceApiServiceInterface
import com.cosmotech.workspace.service.toGenericSecurity
import java.io.ByteArrayOutputStream
import java.time.Instant
import kotlin.String
import kotlin.use
import org.apache.commons.lang3.StringUtils
import org.postgresql.copy.CopyManager
import org.postgresql.core.BaseConnection
import org.postgresql.util.PSQLException
import org.springframework.context.event.EventListener
import org.springframework.core.io.ByteArrayResource
import org.springframework.core.io.Resource
import org.springframework.jdbc.core.JdbcTemplate
import org.springframework.stereotype.Service
import org.springframework.web.multipart.MultipartFile
const val DISTINCT_COLUMN_CHAR = "*"
const val ORDER_DESC_COLUMN_CHAR = "!"
const val COLUMN_DISTINCT_KEYWORD = "distinct"
@Service
@Suppress("TooManyFunctions", "LargeClass")
class DatasetServiceImpl(
private val workspaceService: WorkspaceApiServiceInterface,
private val datasetRepository: DatasetRepository,
private val datasetPartRepository: DatasetPartRepository,
private val csmRbac: CsmRbac,
private val datasetPartManagementFactory: DatasetPartManagementFactory,
private val resourceScanner: ResourceScanner,
private val readerJdbcTemplate: JdbcTemplate
) : CsmPhoenixService(), DatasetApiServiceInterface {
override fun getVerifiedDataset(
organizationId: String,
workspaceId: String,
datasetId: String,
requiredPermission: String
): Dataset {
workspaceService.getVerifiedWorkspace(organizationId, workspaceId)
val dataset =
datasetRepository.findBy(organizationId, workspaceId, datasetId).orElseThrow {
CsmResourceNotFoundException(
"Dataset $datasetId not found in organization $organizationId and workspace $workspaceId")
}
csmRbac.verify(dataset.security.toGenericSecurity(datasetId), requiredPermission)
return dataset
}
override fun findByOrganizationIdWorkspaceIdAndDatasetId(
organizationId: String,
workspaceId: String,
datasetId: String
): Dataset {
workspaceService.getVerifiedWorkspace(organizationId, workspaceId)
return datasetRepository.findBy(organizationId, workspaceId, datasetId).orElseThrow {
CsmResourceNotFoundException(
"Dataset $datasetId not found in organization $organizationId and workspace $workspaceId")
}
}
override fun removeDatasetPartFromDataset(dataset: Dataset, datasetPartId: String) {
dataset.parts.removeIf { it.id == datasetPartId }
datasetRepository.update(dataset)
}
override fun addDatasetPartToDataset(dataset: Dataset, datasetPart: DatasetPart): DatasetPart {
dataset.parts.add(datasetPart)
datasetRepository.update(dataset)
return datasetPart
}
override fun createDatasetAccessControl(
organizationId: String,
workspaceId: String,
datasetId: String,
datasetAccessControl: DatasetAccessControl
): DatasetAccessControl {
val dataset =
getVerifiedDataset(organizationId, workspaceId, datasetId, PERMISSION_WRITE_SECURITY)
val users = listDatasetSecurityUsers(organizationId, workspaceId, datasetId)
require(!users.contains(datasetAccessControl.id)) { "User is already in this Dataset security" }
val rbacSecurity =
csmRbac.setEntityRole(
dataset.security.toGenericSecurity(datasetId),
datasetAccessControl.id,
datasetAccessControl.role)
dataset.security = rbacSecurity.toResourceSecurity()
save(dataset)
val rbacAccessControl =
csmRbac.getAccessControl(
dataset.security.toGenericSecurity(datasetId), datasetAccessControl.id)
return DatasetAccessControl(id = rbacAccessControl.id, role = rbacAccessControl.role)
}
override fun createDataset(
organizationId: String,
workspaceId: String,
datasetCreateRequest: DatasetCreateRequest,
files: Array<MultipartFile>?
): Dataset {
val filesUploaded = files ?: emptyArray()
workspaceService.getVerifiedWorkspace(organizationId, workspaceId, PERMISSION_CREATE_CHILDREN)
logger.debug("Registering Dataset: {}", datasetCreateRequest)
validDatasetCreateRequest(datasetCreateRequest, filesUploaded)
val datasetId = generateId("dataset")
val now = Instant.now().toEpochMilli()
val userId = getCurrentAccountIdentifier(csmPlatformProperties)
val editInfo = DatasetEditInfo(timestamp = now, userId = userId)
val createInfo = DatasetEditInfo(timestamp = now, userId = userId)
val security =
csmRbac
.initSecurity(datasetCreateRequest.security.toGenericSecurity(datasetId))
.toResourceSecurity()
val datasetParts =
datasetCreateRequest.parts
?.map { part ->
val constructDatasetPart =
constructDatasetPart(organizationId, workspaceId, datasetId, part)
datasetPartManagementFactory.storeData(
constructDatasetPart,
filesUploaded.first { it.originalFilename == part.sourceName })
constructDatasetPart
}
?.toMutableList()
if (!datasetParts.isNullOrEmpty()) {
datasetPartRepository.saveAll(datasetParts)
}
val createdDataset =
Dataset(
id = datasetId,
name = datasetCreateRequest.name,
description = datasetCreateRequest.description,
organizationId = organizationId,
workspaceId = workspaceId,
tags = datasetCreateRequest.tags ?: mutableListOf(),
additionalData = datasetCreateRequest.additionalData ?: mutableMapOf(),
parts = datasetParts ?: mutableListOf(),
createInfo = createInfo,
updateInfo = editInfo,
security = security)
logger.debug("Registering Dataset: {}", createdDataset)
return datasetRepository.save(createdDataset)
}
override fun deleteDataset(organizationId: String, workspaceId: String, datasetId: String) {
val dataset = getVerifiedDataset(organizationId, workspaceId, datasetId, PERMISSION_DELETE)
val getRunnerAttachedToDatasetEvent =
GetRunnerAttachedToDataset(this, organizationId, workspaceId, datasetId)
eventPublisher.publishEvent(getRunnerAttachedToDatasetEvent)
val datasetAttachedToRunnerId = getRunnerAttachedToDatasetEvent.response
require(datasetAttachedToRunnerId == null || datasetAttachedToRunnerId.isEmpty()) {
"Dataset $datasetId is defined as a runner dataset ($datasetAttachedToRunnerId). It cannot be deleted"
}
datasetRepository.delete(dataset)
dataset.parts.forEach {
datasetPartRepository.delete(it)
datasetPartManagementFactory.removeData(it)
}
}
override fun getDataset(organizationId: String, workspaceId: String, datasetId: String): Dataset {
return updateSecurityVisibility(
getVerifiedDataset(organizationId, workspaceId, datasetId, PERMISSION_READ))
}
override fun getDatasetAccessControl(
organizationId: String,
workspaceId: String,
datasetId: String,
identityId: String
): DatasetAccessControl {
val dataset =
getVerifiedDataset(organizationId, workspaceId, datasetId, PERMISSION_READ_SECURITY)
val rbacAccessControl =
csmRbac.getAccessControl(dataset.security.toGenericSecurity(datasetId), identityId)
return DatasetAccessControl(id = rbacAccessControl.id, role = rbacAccessControl.role)
}
override fun listDatasetSecurityUsers(
organizationId: String,
workspaceId: String,
datasetId: String
): List<String> {
val dataset =
getVerifiedDataset(organizationId, workspaceId, datasetId, PERMISSION_READ_SECURITY)
return csmRbac.getEntities(dataset.security.toGenericSecurity(datasetId))
}
override fun listDatasets(
organizationId: String,
workspaceId: String,
page: Int?,
size: Int?
): List<Dataset> {
val workspace = workspaceService.getVerifiedWorkspace(organizationId, workspaceId)
val defaultPageSize = csmPlatformProperties.databases.resources.dataset.defaultPageSize
val pageable = constructPageRequest(page, size, defaultPageSize)
val isAdmin =
csmRbac.isAdmin(
workspace.security.toGenericSecurity(workspaceId), getCommonRolesDefinition())
val result: MutableList<Dataset>
val rbacEnabled = !isAdmin && this.csmPlatformProperties.rbac.enabled
if (pageable == null) {
result =
findAllPaginated(defaultPageSize) {
if (rbacEnabled) {
val currentUser = getCurrentAccountIdentifier(this.csmPlatformProperties)
datasetRepository
.findByOrganizationIdAndWorkspaceId(organizationId, workspaceId, currentUser, it)
.toList()
} else {
datasetRepository
.findByOrganizationIdAndWorkspaceIdNoSecurity(organizationId, workspaceId, it)
.toList()
}
}
} else {
result =
if (rbacEnabled) {
val currentUser = getCurrentAccountIdentifier(this.csmPlatformProperties)
datasetRepository
.findByOrganizationIdAndWorkspaceId(
organizationId, workspaceId, currentUser, pageable)
.toList()
} else {
datasetRepository
.findByOrganizationIdAndWorkspaceIdNoSecurity(organizationId, workspaceId, pageable)
.toList()
}
}
result.forEach { it.security = updateSecurityVisibility(it).security }
return result
}
override fun deleteDatasetAccessControl(
organizationId: String,
workspaceId: String,
datasetId: String,
identityId: String
) {
val dataset =
getVerifiedDataset(organizationId, workspaceId, datasetId, PERMISSION_WRITE_SECURITY)
val rbacSecurity =
csmRbac.removeEntity(dataset.security.toGenericSecurity(datasetId), identityId)
dataset.security = rbacSecurity.toResourceSecurity()
save(dataset)
}
override fun updateDatasetDefaultSecurity(
organizationId: String,
workspaceId: String,
datasetId: String,
datasetRole: DatasetRole
): DatasetSecurity {
val dataset =
getVerifiedDataset(organizationId, workspaceId, datasetId, PERMISSION_WRITE_SECURITY)
val rbacSecurity =
csmRbac.setDefault(dataset.security.toGenericSecurity(datasetId), datasetRole.role)
dataset.security = rbacSecurity.toResourceSecurity()
save(dataset)
return dataset.security
}
override fun updateDataset(
organizationId: String,
workspaceId: String,
datasetId: String,
datasetUpdateRequest: DatasetUpdateRequest,
files: Array<MultipartFile>?
): Dataset {
logger.debug("Updating Dataset: {}", datasetUpdateRequest)
val filesUploaded = files ?: emptyArray()
val previousDataset =
getVerifiedDataset(organizationId, workspaceId, datasetId, PERMISSION_WRITE)
validDatasetUpdateRequest(datasetUpdateRequest, filesUploaded)
val newDatasetParts =
datasetUpdateRequest.parts
?.map { part ->
val constructDatasetPart =
constructDatasetPart(organizationId, workspaceId, datasetId, part)
datasetPartManagementFactory.storeData(
constructDatasetPart,
filesUploaded.first { it.originalFilename == part.sourceName })
constructDatasetPart
}
?.toMutableList()
val updatedDataset =
Dataset(
id = datasetId,
name = datasetUpdateRequest.name ?: previousDataset.name,
description = datasetUpdateRequest.description ?: previousDataset.description,
organizationId = organizationId,
workspaceId = workspaceId,
tags = datasetUpdateRequest.tags ?: previousDataset.tags,
additionalData = datasetUpdateRequest.additionalData ?: previousDataset.additionalData,
parts = newDatasetParts ?: previousDataset.parts,
createInfo = previousDataset.createInfo,
updateInfo =
DatasetEditInfo(
timestamp = Instant.now().toEpochMilli(),
userId = getCurrentAccountIdentifier(csmPlatformProperties)),
security = datasetUpdateRequest.security ?: previousDataset.security)
logger.debug("New Dataset info to register: {}", updatedDataset)
if (newDatasetParts != null) {
datasetPartRepository.saveAll(newDatasetParts)
}
val newDataset = datasetRepository.update(updatedDataset)
if (previousDataset.parts.isNotEmpty()) {
datasetPartRepository.deleteAll(previousDataset.parts)
previousDataset.parts.forEach { datasetPartManagementFactory.removeData(it) }
}
return newDataset
}
override fun updateDatasetAccessControl(
organizationId: String,
workspaceId: String,
datasetId: String,
identityId: String,
datasetRole: DatasetRole
): DatasetAccessControl {
val dataset =
getVerifiedDataset(organizationId, workspaceId, datasetId, PERMISSION_WRITE_SECURITY)
csmRbac.checkEntityExists(
dataset.security.toGenericSecurity(datasetId),
identityId,
"User '$identityId' not found in dataset $datasetId")
val rbacSecurity =
csmRbac.setEntityRole(
dataset.security.toGenericSecurity(datasetId), identityId, datasetRole.role)
dataset.security = rbacSecurity.toResourceSecurity()
save(dataset)
val rbacAccessControl =
csmRbac.getAccessControl(dataset.security.toGenericSecurity(datasetId), identityId)
return DatasetAccessControl(id = rbacAccessControl.id, role = rbacAccessControl.role)
}
fun updateSecurityVisibility(dataset: Dataset): Dataset {
if (csmRbac
.check(dataset.security.toGenericSecurity(dataset.id), PERMISSION_READ_SECURITY)
.not()) {
val username = getCurrentAccountIdentifier(csmPlatformProperties)
val retrievedAC = dataset.security.accessControlList.firstOrNull { it.id == username }
val accessControlList =
if (retrievedAC != null) {
mutableListOf(retrievedAC)
} else {
mutableListOf()
}
return dataset.copy(
security =
DatasetSecurity(
default = dataset.security.default, accessControlList = accessControlList))
}
return dataset
}
fun save(dataset: Dataset): Dataset {
dataset.updateInfo =
DatasetEditInfo(
timestamp = Instant.now().toEpochMilli(),
userId = getCurrentAccountIdentifier(csmPlatformProperties))
return datasetRepository.save(dataset)
}
override fun createDatasetPart(
organizationId: String,
workspaceId: String,
datasetId: String,
file: MultipartFile,
datasetPartCreateRequest: DatasetPartCreateRequest
): DatasetPart {
val dataset = getVerifiedDataset(organizationId, workspaceId, datasetId, PERMISSION_WRITE)
validDatasetPartCreateRequest(datasetPartCreateRequest, file)
val createdDatasetPart =
constructDatasetPart(organizationId, workspaceId, datasetId, datasetPartCreateRequest)
datasetPartManagementFactory.storeData(createdDatasetPart, file)
datasetPartRepository.save(createdDatasetPart)
return addDatasetPartToDataset(dataset, createdDatasetPart)
}
override fun createDatasetPartFromResource(
organizationId: String,
workspaceId: String,
datasetId: String,
file: Resource,
datasetPartCreateRequest: DatasetPartCreateRequest
): DatasetPart {
val dataset = getVerifiedDataset(organizationId, workspaceId, datasetId, PERMISSION_WRITE)
val createdDatasetPart =
constructDatasetPart(organizationId, workspaceId, datasetId, datasetPartCreateRequest)
datasetPartManagementFactory.storeData(createdDatasetPart, file)
datasetPartRepository.save(createdDatasetPart)
return addDatasetPartToDataset(dataset, createdDatasetPart)
}
override fun constructDatasetPart(
organizationId: String,
workspaceId: String,
datasetId: String,
datasetPartCreateRequest: DatasetPartCreateRequest
): DatasetPart {
logger.debug("Registering DatasetPart: {}", datasetPartCreateRequest)
val now = Instant.now().toEpochMilli()
val userId = getCurrentAccountIdentifier(csmPlatformProperties)
val editInfo = DatasetEditInfo(timestamp = now, userId = userId)
val createdDatasetPart =
DatasetPart(
id = generateId("datasetpart", prependPrefix = "dp-"),
datasetId = datasetId,
name = datasetPartCreateRequest.name,
description = datasetPartCreateRequest.description,
tags = datasetPartCreateRequest.tags ?: mutableListOf(),
additionalData = datasetPartCreateRequest.additionalData ?: mutableMapOf(),
type = datasetPartCreateRequest.type ?: DatasetPartTypeEnum.File,
organizationId = organizationId,
workspaceId = workspaceId,
createInfo = editInfo,
updateInfo = editInfo,
sourceName = datasetPartCreateRequest.sourceName)
logger.debug("Registering DatasetPart: {}", createdDatasetPart)
return createdDatasetPart
}
override fun deleteDatasetPart(
organizationId: String,
workspaceId: String,
datasetId: String,
datasetPartId: String
) {
val dataset = getVerifiedDataset(organizationId, workspaceId, datasetId, PERMISSION_WRITE)
val datasetPart =
datasetPartRepository
.findBy(organizationId, workspaceId, datasetId, datasetPartId)
.orElseThrow {
CsmResourceNotFoundException(
"Dataset Part $datasetPartId not found in organization $organizationId, " +
"workspace $workspaceId and dataset $datasetId")
}
removeDatasetPartFromDataset(dataset, datasetPartId)
datasetPartManagementFactory.removeData(datasetPart)
datasetPartRepository.delete(datasetPart)
}
override fun downloadDatasetPart(
organizationId: String,
workspaceId: String,
datasetId: String,
datasetPartId: String
): Resource {
val datasetPart = getDatasetPart(organizationId, workspaceId, datasetId, datasetPartId)
return datasetPartManagementFactory.getData(datasetPart)
}
override fun getDatasetPart(
organizationId: String,
workspaceId: String,
datasetId: String,
datasetPartId: String
): DatasetPart {
getVerifiedDataset(organizationId, workspaceId, datasetId, PERMISSION_READ)
return datasetPartRepository
.findBy(organizationId, workspaceId, datasetId, datasetPartId)
.orElseThrow {
CsmResourceNotFoundException(
"Dataset Part $datasetPartId not found in organization $organizationId, " +
"workspace $workspaceId and dataset $datasetId")
}
}
override fun listDatasetParts(
organizationId: String,
workspaceId: String,
datasetId: String,
page: Int?,
size: Int?
): List<DatasetPart> {
val dataset = getVerifiedDataset(organizationId, workspaceId, datasetId, PERMISSION_READ)
val defaultPageSize = csmPlatformProperties.databases.resources.dataset.defaultPageSize
val pageable = constructPageRequest(page, size, defaultPageSize)
val isAdmin =
csmRbac.isAdmin(dataset.security.toGenericSecurity(datasetId), getCommonRolesDefinition())
val result: MutableList<DatasetPart>
val rbacEnabled = !isAdmin && this.csmPlatformProperties.rbac.enabled
if (pageable == null) {
result =
findAllPaginated(defaultPageSize) {
if (rbacEnabled) {
val currentUser = getCurrentAccountIdentifier(this.csmPlatformProperties)
datasetPartRepository
.findByOrganizationIdAndWorkspaceIdAndDatasetId(
organizationId, workspaceId, datasetId, currentUser, it)
.toList()
} else {
datasetPartRepository
.findByOrganizationIdAndWorkspaceIdAndDatasetIdNoSecurity(
organizationId, workspaceId, datasetId, it)
.toList()
}
}
} else {
result =
if (rbacEnabled) {
val currentUser = getCurrentAccountIdentifier(this.csmPlatformProperties)
datasetPartRepository
.findByOrganizationIdAndWorkspaceIdAndDatasetId(
organizationId, workspaceId, datasetId, currentUser, pageable)
.toList()
} else {
datasetPartRepository
.findByOrganizationIdAndWorkspaceIdAndDatasetIdNoSecurity(
organizationId, workspaceId, datasetId, pageable)
.toList()
}
}
return result
}
override fun queryData(
organizationId: String,
workspaceId: String,
datasetId: String,
datasetPartId: String,
selects: List<String>?,
sums: List<String>?,
avgs: List<String>?,
counts: List<String>?,
mins: List<String>?,
maxs: List<String>?,
offset: Int?,
limit: Int?,
groupBys: List<String>?,
orderBys: List<String>?
): Resource {
val datasetPart = getDatasetPart(organizationId, workspaceId, datasetId, datasetPartId)
require(datasetPart.type != DatasetPartTypeEnum.File) {
"Cannot query data on a File Dataset Part"
}
validateParameters(
mapOf(
"selects" to selects,
"sums" to sums,
"avgs" to avgs,
"counts" to counts,
"mins" to mins,
"maxs" to maxs,
"groupBys" to groupBys,
"orderBys" to orderBys))
val query =
constructQuery(
datasetPartId,
selects,
sums,
avgs,
counts,
mins,
maxs,
offset,
limit,
groupBys,
orderBys)
val outputStream = ByteArrayOutputStream()
try {
readerJdbcTemplate.dataSource!!.connection.use { connection ->
CopyManager(connection as BaseConnection)
.copyOut("COPY ($query) TO STDOUT WITH CSV HEADER", outputStream)
}
} catch (e: PSQLException) {
throw IllegalArgumentException(
"Error while querying Dataset Part $datasetPartId: ($query)", e)
}
return ByteArrayResource(outputStream.toByteArray())
}
private fun validateParameters(parametersToValidate: Map<String, List<String>?>) {
parametersToValidate.forEach { (parameterName, parameterValues) ->
if (parameterValues != null) {
require(parameterValues.all { Regex("[a-zA-Z0-9_*!\' ]+").matches(it) }) {
"Invalid parameter value found in '$parameterName': " +
"parameter name must match [a-zA-Z0-9_*!\' ]+ (found: ${parameterValues})"
}
require(parameterValues.all { it.trim() != "*" && it.trim() != "!" }) {
"Invalid parameter value found in '$parameterName': " +
"parameter name must not be \"*\" or \"!\" (found: ${parameterValues})"
}
}
}
}
@Suppress("LongParameterList")
private fun constructQuery(
datasetPartId: String,
selects: List<String>?,
sums: List<String>?,
avgs: List<String>?,
counts: List<String>?,
mins: List<String>?,
maxs: List<String>?,
offset: Int?,
limit: Int?,
groupBys: List<String>?,
orderBys: List<String>?
): String {
val tableName = "${DATASET_INPUTS_SCHEMA}.${datasetPartId.sanitizeDatasetPartId()}"
val selectClauses = constructClause(selects, null, null)
val sumClauses = constructClause(sums, AggregationType.Sum, "float8")
val avgClauses = constructClause(avgs, AggregationType.Avg, "float8")
val countClauses = constructClause(counts, AggregationType.Count, null)
val minClauses = constructClause(mins, AggregationType.Min, "float8")
val maxClauses = constructClause(maxs, AggregationType.Max, "float8")
val allSelectClauses =
mutableListOf(selectClauses, sumClauses, avgClauses, countClauses, minClauses, maxClauses)
.filter { it.isNotBlank() }
.joinToString(separator = ",")
val query =
StringBuilder("SELECT %s FROM %s ".format(allSelectClauses.ifBlank { "*" }, tableName))
val groupByClauses = constructClause(groupBys, null, null)
if (groupByClauses.isNotBlank()) {
query.append("GROUP BY $groupByClauses ")
}
val orderByClauses = constructClause(orderBys, null, null, true)
if (orderByClauses.isNotBlank()) {
query.append("ORDER BY $orderByClauses ")
}
addLimitOffset(limit, offset, query)
logger.debug(query.toString())
return query.toString()
}
private fun addLimitOffset(limit: Int?, offset: Int?, query: StringBuilder) {
if (limit != null) {
query.append(" LIMIT $limit")
}
if (offset != null) {
query.append(" OFFSET $offset")
}
}
private fun constructClause(
columnNames: List<String>?,
aggregationFunction: AggregationType?,
castType: String?,
orderable: Boolean = false
): String {
return columnNames?.joinToString(separator = ",") { columnName ->
if (aggregationFunction != null) {
createAggregationClause(aggregationFunction.name.lowercase(), columnName, castType)
} else {
if (orderable) {
createOrderClause(columnName)
} else {
val (isMarkedAsDistinct, actualColumnName) = getDistinctData(columnName)
createDistinctClause(isMarkedAsDistinct, actualColumnName)
}
}
} ?: ""
}
private fun createOrderClause(columnName: String): String {
val isMarkedAsDesc = columnName.startsWith(ORDER_DESC_COLUMN_CHAR)
return if (isMarkedAsDesc) {
val columnNameWrapped = StringUtils.wrapIfMissing(columnName.substring(1), "\"")
"$columnNameWrapped DESC"
} else {
val columnNameWrapped = StringUtils.wrapIfMissing(columnName, "\"")
"$columnNameWrapped ASC"
}
}
private fun getDistinctData(columnSpec: String) =
Pair(
columnSpec.endsWith(DISTINCT_COLUMN_CHAR),
columnSpec.substringBeforeLast(DISTINCT_COLUMN_CHAR))
private fun createDistinctClause(isDistinct: Boolean, columnName: String): String {
return "%s %s"
.format(
if (isDistinct) COLUMN_DISTINCT_KEYWORD.uppercase() else "",
StringUtils.wrapIfMissing(columnName, "\""))
}
private fun createAggregationClause(
aggFunction: String,
columnName: String,
castType: String?
): String {
val queryPart = StringBuilder(aggFunction)
val (isMarkedAsDistinct, actualColumnName) = getDistinctData(columnName)
return queryPart
.addAggregatedColumn(isMarkedAsDistinct, actualColumnName)
.addCastIfAny(castType)
.addRenameClause(isMarkedAsDistinct, actualColumnName, aggFunction)
.toString()
}
private fun StringBuilder.addAggregatedColumn(
isDistinct: Boolean,
columnName: String
): StringBuilder = apply {
this.append("(%s".format(createDistinctClause(isDistinct, columnName)))
}
private fun StringBuilder.addCastIfAny(castType: String?): StringBuilder = apply {
this.append(if (!castType.isNullOrEmpty()) "::$castType) " else ") ")
}
private fun StringBuilder.addRenameClause(
isDistinct: Boolean,
columnName: String,
aggFunction: String
): StringBuilder = apply {
this.append(
"as \"%s%s%s\""
.format(
aggFunction, if (isDistinct) "_${COLUMN_DISTINCT_KEYWORD}_" else "_", columnName))
}
override fun updateDatasetPart(
organizationId: String,
workspaceId: String,
datasetId: String,
datasetPartId: String,
datasetPartUpdateRequest: DatasetPartUpdateRequest
): DatasetPart {
val dataset = getVerifiedDataset(organizationId, workspaceId, datasetId, PERMISSION_WRITE)
val datasetPart =
datasetPartRepository
.findBy(organizationId, workspaceId, datasetId, datasetPartId)
.orElseThrow {
CsmResourceNotFoundException(
"Dataset Part $datasetPartId not found in organization $organizationId, " +
"workspace $workspaceId and dataset $datasetId")
}
val now = Instant.now().toEpochMilli()
val userId = getCurrentAccountIdentifier(csmPlatformProperties)
val editInfo = DatasetEditInfo(timestamp = now, userId = userId)
dataset.parts
.find { it.id == datasetPartId }
?.let {
it.sourceName = datasetPartUpdateRequest.sourceName ?: it.sourceName
it.description = datasetPartUpdateRequest.description ?: it.description
it.tags = datasetPartUpdateRequest.tags ?: it.tags
it.additionalData = datasetPartUpdateRequest.additionalData ?: it.additionalData
it.updateInfo = editInfo
}
val datasetPartUpdater = datasetPart.copy()
datasetPartUpdater.sourceName = datasetPartUpdateRequest.sourceName ?: datasetPart.sourceName
datasetPartUpdater.description = datasetPartUpdateRequest.description ?: datasetPart.description
datasetPartUpdater.tags = datasetPartUpdateRequest.tags ?: datasetPart.tags
datasetPartUpdater.additionalData =
datasetPartUpdateRequest.additionalData ?: datasetPart.additionalData
datasetPartUpdater.updateInfo = editInfo
datasetRepository.update(dataset)
return datasetPartRepository.update(datasetPartUpdater)
}
override fun replaceDatasetPart(
organizationId: String,
workspaceId: String,
datasetId: String,
datasetPartId: String,
file: MultipartFile,
datasetPartUpdateRequest: DatasetPartUpdateRequest?
): DatasetPart {
val dataset = getVerifiedDataset(organizationId, workspaceId, datasetId, PERMISSION_WRITE)
validateFile(file)
val datasetPart =
datasetPartRepository
.findBy(organizationId, workspaceId, datasetId, datasetPartId)
.orElseThrow {
CsmResourceNotFoundException(
"Dataset Part $datasetPartId not found in organization $organizationId, " +
"workspace $workspaceId and dataset $datasetId")
}
val now = Instant.now().toEpochMilli()
val userId = getCurrentAccountIdentifier(csmPlatformProperties)
val editInfo = DatasetEditInfo(timestamp = now, userId = userId)
val datasetPartUpdater = datasetPart.copy()
dataset.parts
.find { it.id == datasetPartId }
?.let {
it.sourceName = datasetPartUpdateRequest?.sourceName ?: it.sourceName
it.description = datasetPartUpdateRequest?.description ?: it.description
it.tags = datasetPartUpdateRequest?.tags ?: it.tags
it.additionalData = datasetPartUpdateRequest?.additionalData ?: it.additionalData
it.updateInfo = editInfo
}
datasetPartUpdater.sourceName = datasetPartUpdateRequest?.sourceName ?: datasetPart.sourceName
datasetPartUpdater.description =
datasetPartUpdateRequest?.description ?: datasetPart.description
datasetPartUpdater.tags = datasetPartUpdateRequest?.tags ?: datasetPart.tags
datasetPartUpdater.updateInfo = editInfo
datasetPartManagementFactory.removeData(datasetPart)
datasetPartManagementFactory.storeData(datasetPartUpdater, file, true)
datasetRepository.update(dataset)
return datasetPartRepository.update(datasetPartUpdater)
}
override fun searchDatasetParts(
organizationId: String,
workspaceId: String,
datasetId: String,
requestBody: List<String>,
page: Int?,
size: Int?
): List<DatasetPart> {
if (requestBody.isEmpty()) {
return listDatasetParts(organizationId, workspaceId, datasetId, page, size)
}
getVerifiedDataset(organizationId, workspaceId, datasetId)
val defaultPageSize = csmPlatformProperties.databases.resources.dataset.defaultPageSize
val pageable = constructPageRequest(page, size, defaultPageSize)
val datasetPartList =
if (pageable != null) {
datasetPartRepository
.findDatasetPartByTags(organizationId, workspaceId, datasetId, requestBody, pageable)
.toList()
} else {
findAllPaginated(defaultPageSize) {
datasetPartRepository
.findDatasetPartByTags(organizationId, workspaceId, datasetId, requestBody, it)
.toList()
}
}
return datasetPartList
}
override fun searchDatasets(
organizationId: String,
workspaceId: String,
requestBody: List<String>,
page: Int?,
size: Int?
): List<Dataset> {
if (requestBody.isEmpty()) {
return listDatasets(organizationId, workspaceId, page, size)
}
workspaceService.getVerifiedWorkspace(organizationId, workspaceId)
val defaultPageSize = csmPlatformProperties.databases.resources.dataset.defaultPageSize
val pageable = constructPageRequest(page, size, defaultPageSize)
val datasetList =
if (pageable != null) {
datasetRepository
.findDatasetByTags(organizationId, workspaceId, requestBody, pageable)
.toList()
} else {
findAllPaginated(defaultPageSize) {
datasetRepository
.findDatasetByTags(organizationId, workspaceId, requestBody, it)
.toList()
}
}
datasetList.forEach { it.security = updateSecurityVisibility(it).security }
return datasetList
}
@EventListener(RunnerDeleted::class)
fun onRunnerDeleted(runnerDeletedEvent: RunnerDeleted) {
val organizationId = runnerDeletedEvent.organizationId
val workspaceId = runnerDeletedEvent.workspaceId
val datasetParameterId = runnerDeletedEvent.datasetParameterId
val dataset =
datasetRepository.findBy(organizationId, workspaceId, datasetParameterId).orElseThrow {
CsmResourceNotFoundException(
"Dataset $datasetParameterId not found in organization $organizationId and workspace $workspaceId")
}
datasetRepository.delete(dataset)
dataset.parts.forEach {
datasetPartRepository.delete(it)
datasetPartManagementFactory.removeData(it)
}
}
private fun validDatasetPartCreateRequest(
datasetPartCreateRequest: DatasetPartCreateRequest,
file: MultipartFile
) {
require(datasetPartCreateRequest.name.isNotBlank()) { "Dataset Part name must not be blank" }
require(datasetPartCreateRequest.sourceName == file.originalFilename) {
"You must upload a file with the same name as the Dataset Part sourceName. " +
"You provided ${datasetPartCreateRequest.sourceName} and ${file.originalFilename} instead."
}
validateFile(file)
}
private fun validateFile(file: MultipartFile) {
val originalFilename = file.originalFilename
require(!originalFilename.isNullOrBlank()) { "File name must not be null or blank" }
require(!originalFilename.contains("..") && !originalFilename.startsWith("/")) {
"Invalid filename: '${originalFilename}'. File name should neither contains '..' nor starts by '/'."
}
resourceScanner.scanMimeTypes(
originalFilename,
file.inputStream,
csmPlatformProperties.upload.authorizedMimeTypes.datasets)
}
private fun validDatasetCreateRequest(
datasetCreateRequest: DatasetCreateRequest,
files: Array<MultipartFile>
) {
require(datasetCreateRequest.name.isNotBlank()) { "Dataset name must not be blank" }
require(files.size == datasetCreateRequest.parts?.size) {